Gene
RNA
| Item | Value |
|---|---|
| gene id | G2338673 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 383336 ~ 383580 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: caskin-1, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2677208 | True | 245 | lncRNA | 0.59 | 1 | 383336 | 383580 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prpsap2 | LOC103393631 | coding | downstream | 90016 | 247351 ~ 293320 (-) |
| LOC110511686 | LOC106591320 | coding | downstream | 265247 | 52434 ~ 118089 (-) |
| LOC118947117 | NA | coding | downstream | 335036 | 47623 ~ 51453 (-) |
| LOC110511701 | traf7 | coding | upstream | 62920 | 446215 ~ 512472 (-) |
| LOC110517482 | fscn1 | coding | upstream | 397186 | 780766 ~ 808870 (-) |
| LOC118947119 | NA | coding | upstream | 415583 | 799163 ~ 800016 (-) |
| LOC110516334 | LOC106594246 | coding | upstream | 471782 | 855362 ~ 958479 (-) |
| LOC110513313 | slc29a4 | coding | upstream | 590161 | 973741 ~ 1003184 (-) |
| G2338671 | NA | non-coding | downstream | 5390 | 377717 ~ 377946 (-) |
| G2338669 | NA | non-coding | downstream | 7394 | 375651 ~ 375942 (-) |
| G2338668 | NA | non-coding | downstream | 10464 | 372575 ~ 372872 (-) |
| G2338664 | NA | non-coding | downstream | 21151 | 361884 ~ 362185 (-) |
| G2338663 | NA | non-coding | downstream | 21513 | 361571 ~ 361823 (-) |
| G2338674 | NA | non-coding | upstream | 290 | 383870 ~ 385464 (-) |
| G2338678 | NA | non-coding | upstream | 15076 | 398656 ~ 398878 (-) |
| G2338681 | NA | non-coding | upstream | 19990 | 403570 ~ 406961 (-) |
| G2338687 | NA | non-coding | upstream | 30568 | 414148 ~ 414680 (-) |
| G2338688 | NA | non-coding | upstream | 31197 | 414777 ~ 416232 (-) |
| G2338672 | NA | other | downstream | 4453 | 378179 ~ 378883 (-) |
| G2338590 | NA | other | downstream | 196681 | 184377 ~ 186655 (-) |
| G2338725 | NA | other | upstream | 186247 | 569827 ~ 570378 (-) |
| G2338752 | NA | other | upstream | 279957 | 663537 ~ 666097 (-) |
| G2338753 | NA | other | upstream | 280648 | 664228 ~ 664685 (-) |
| G2339019 | NA | other | upstream | 308925 | 692505 ~ 702324 (-) |
