G2338674


Basic Information

Item Value
gene id G2338674
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 383870 ~ 385464 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2677209
cttgttcaacagcatcactacactataacccttgttcaacagcaacacaacaccacactgtaacccttgttcaacagcaacaccccactataacccttgttcaacagcaacactacactataacccttgttcaacagcaacacaacactgtaatccttgttcaacagcaacaccccactataacccttgttcaacagcaacactacactgtaacccttgttcaacagcaacactacactgtaacccttgttcaacagcaacacaacactataacccttgttcaacagcaacactacactataacccttgttcaacagcatcactacactataacccttgttcaacagcaacaccccactgtaacccttgttcaacagcatcactacactataacccttgttcaacagcatcactacactataacccttgttcaacagcaacaccacactgtaacccttgttcaacagcaacacccgaCTATatcccttgttcaacagcaacagcaacactacactgtaaccttGTTCAACAGCTacaccccactataacccttgttcaacagctacaccccactataacccttgttcaacagcaacactacactgtaacccttgttcaacagcaacactacactgtaacccttgttcaacagcaacactacactgtaacccttgttcaacagcaacacaacactacactataacccttgttcaacagcaacaccacactataacccttgttcaacagcaacactacactataacccttgttcaacagcaacaccacactataacccttgtttaacagcaacactacactataacccttgttcaacagcaacacaacactataacccttgttcaacagcaacactacactataacccttgttcaacagcaacaccccactataacccttgttttAAATGGATGGGgtgacaacagcaacaacagaaaAAACAACTTAAACTGTAACAGATGACATAGACCACAACTTTAAACTGTAACAGATGACATAGACCACAACTTTAACCTGTAACAGATGACATAGACCACAACTTTAAGCTGTAACAGATGACATAGACCACAACTTTAACCTGTAACAGATGACATAGACCACAACTTTAAGCTGTAACAGATGACATAGACCACAACTTTAAGCTGTAA

Function

NR:

description
proline-rich extensin-like protein EPR1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2677209 True 1166 lncRNA 0.41 2 383870 385464

Neighbor

gene id symbol gene type direction distance location
prpsap2 LOC103393631 coding downstream 90550 247351 ~ 293320 (-)
LOC110511686 LOC106591320 coding downstream 265781 52434 ~ 118089 (-)
LOC118947117 NA coding downstream 335570 47623 ~ 51453 (-)
LOC110511701 traf7 coding upstream 61036 446215 ~ 512472 (-)
LOC110517482 fscn1 coding upstream 395302 780766 ~ 808870 (-)
LOC118947119 NA coding upstream 413699 799163 ~ 800016 (-)
LOC110516334 LOC106594246 coding upstream 469898 855362 ~ 958479 (-)
LOC110513313 slc29a4 coding upstream 588277 973741 ~ 1003184 (-)
G2338673 NA non-coding downstream 290 383336 ~ 383580 (-)
G2338671 NA non-coding downstream 5924 377717 ~ 377946 (-)
G2338669 NA non-coding downstream 7928 375651 ~ 375942 (-)
G2338668 NA non-coding downstream 10998 372575 ~ 372872 (-)
G2338664 NA non-coding downstream 21685 361884 ~ 362185 (-)
G2338678 NA non-coding upstream 13192 398656 ~ 398878 (-)
G2338681 NA non-coding upstream 18106 403570 ~ 406961 (-)
G2338687 NA non-coding upstream 28684 414148 ~ 414680 (-)
G2338688 NA non-coding upstream 29313 414777 ~ 416232 (-)
G2338686 NA non-coding upstream 30550 416014 ~ 418678 (-)
G2338672 NA other downstream 4987 378179 ~ 378883 (-)
G2338590 NA other downstream 197215 184377 ~ 186655 (-)
G2338725 NA other upstream 184363 569827 ~ 570378 (-)
G2338752 NA other upstream 278073 663537 ~ 666097 (-)
G2338753 NA other upstream 278764 664228 ~ 664685 (-)
G2339019 NA other upstream 307041 692505 ~ 702324 (-)

Expression


Co-expression Network