Gene
RNA
| Item | Value |
|---|---|
| gene id | G2338701 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 475868 ~ 476688 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2677252 | True | 286 | lncRNA | 0.47 | 2 | 475868 | 476688 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prpsap2 | LOC103393631 | coding | downstream | 182548 | 247351 ~ 293320 (-) |
| LOC110511686 | LOC106591320 | coding | downstream | 357779 | 52434 ~ 118089 (-) |
| LOC118947117 | NA | coding | downstream | 427568 | 47623 ~ 51453 (-) |
| LOC110517482 | fscn1 | coding | upstream | 304078 | 780766 ~ 808870 (-) |
| LOC118947119 | NA | coding | upstream | 322475 | 799163 ~ 800016 (-) |
| LOC110516334 | LOC106594246 | coding | upstream | 378674 | 855362 ~ 958479 (-) |
| LOC110513313 | slc29a4 | coding | upstream | 497053 | 973741 ~ 1003184 (-) |
| LOC110518374 | cpsf4 | coding | upstream | 550057 | 1026745 ~ 1048179 (-) |
| G2338699 | NA | non-coding | downstream | 7846 | 467663 ~ 468022 (-) |
| LOC110511701 | traf7 | non-coding | downstream | 25339 | 446215 ~ 512472 (-) |
| G2338696 | NA | non-coding | downstream | 34568 | 441063 ~ 441300 (-) |
| G2338689 | NA | non-coding | downstream | 52118 | 423386 ~ 423750 (-) |
| G2338685 | NA | non-coding | downstream | 52654 | 420305 ~ 423214 (-) |
| G2338705 | NA | non-coding | upstream | 17414 | 494102 ~ 494927 (-) |
| G2338706 | NA | non-coding | upstream | 30367 | 507055 ~ 507470 (-) |
| G2338707 | NA | non-coding | upstream | 31661 | 508349 ~ 508769 (-) |
| G2338728 | NA | non-coding | upstream | 98143 | 574831 ~ 575040 (-) |
| G2338729 | NA | non-coding | upstream | 98712 | 575400 ~ 575741 (-) |
| G2338672 | NA | other | downstream | 96985 | 378179 ~ 378883 (-) |
| G2338590 | NA | other | downstream | 289213 | 184377 ~ 186655 (-) |
| G2338725 | NA | other | upstream | 93139 | 569827 ~ 570378 (-) |
| G2338752 | NA | other | upstream | 186849 | 663537 ~ 666097 (-) |
| G2338753 | NA | other | upstream | 187540 | 664228 ~ 664685 (-) |
| G2339019 | NA | other | upstream | 215817 | 692505 ~ 702324 (-) |
| G2339043 | LOC102799139 | other | upstream | 362495 | 839183 ~ 844104 (-) |
