G2338741


Basic Information

Item Value
gene id G2338741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 609097 ~ 609469 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2677298
CCGGGTCCAGTTCCATAGAGGAACCTGAATAGTCCTAAACCAGGAACACTAGAAACACCAGGGTGCCCTCTAGTGGCACCCTCAGGGATTACACTCCGTGATGACCTCTTAATTAACCTGTGACAGGTTTTTATTACTAGACTAAATGAATTGGAAAAAGGAAGTAGTCACAGTGGTCTTTATAGACCAGGTACCATTGTAACACAGTACATTCTATTAACACAGAAAACCATACACATACATTGAATAGACTGACAGAgaccatttgaacatcttggccatgttctgttataatctccacagccagaagagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2677298 True 313 lncRNA 0.42 2 609097 609469

Neighbor

gene id symbol gene type direction distance location
LOC118947125 NA coding upstream 60669 465511 ~ 562271 (+)
LOC110516853 LOC106579185 coding upstream 171971 301775 ~ 437126 (+)
LOC118947116 fam83g coding upstream 389584 201747 ~ 219513 (+)
grapa LOC106602037 coding upstream 425082 146033 ~ 184015 (+)
LOC118947124 b9d1 coding upstream 562210 40792 ~ 46887 (+)
LOC118947126 rpusd1 coding downstream 69984 679453 ~ 693043 (+)
LOC110511299 LOC106591863 coding downstream 94014 703483 ~ 758282 (+)
LOC110517977 LOC102799139 coding downstream 229677 839146 ~ 843678 (+)
LOC110517915 atp5j2 coding downstream 412357 1021826 ~ 1024705 (+)
LOC118947121 NA coding downstream 416892 1026356 ~ 1028105 (+)
G2338740 NA non-coding upstream 27959 580893 ~ 581138 (+)
G2338737 NA non-coding upstream 28978 579918 ~ 580119 (+)
G2338732 NA non-coding upstream 31186 577590 ~ 577911 (+)
G2338731 NA non-coding upstream 32206 576657 ~ 576891 (+)
G2338730 NA non-coding upstream 32620 576272 ~ 576477 (+)
G2338743 NA non-coding downstream 1997 611466 ~ 611969 (+)
G2338755 NA non-coding downstream 59391 668860 ~ 669105 (+)
G2338761 NA non-coding downstream 66856 676325 ~ 676557 (+)
G2338763 NA non-coding downstream 68255 677724 ~ 678181 (+)
G2338772 NA non-coding downstream 97080 706549 ~ 706890 (+)
G2338488 NA other upstream 402869 205182 ~ 206228 (+)
G2338845 NA other downstream 318893 928362 ~ 929635 (+)

Expression


Co-expression Network