Gene
RNA
| Item | Value |
|---|---|
| gene id | G2339024 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 703484 ~ 703821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2677753 | False | 313 | lncRNA | 0.37 | 1 | 703484 | 703796 |
| TU2677754 | False | 270 | lncRNA | 0.37 | 1 | 703527 | 703796 |
| TU2677756 | True | 295 | lncRNA | 0.38 | 1 | 703527 | 703821 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511701 | traf7 | coding | downstream | 191012 | 446215 ~ 512472 (-) |
| prpsap2 | LOC103393631 | coding | downstream | 410164 | 247351 ~ 293320 (-) |
| LOC110511686 | LOC106591320 | coding | downstream | 585395 | 52434 ~ 118089 (-) |
| LOC118947117 | NA | coding | downstream | 655184 | 47623 ~ 51453 (-) |
| LOC110517482 | fscn1 | coding | upstream | 76945 | 780766 ~ 808870 (-) |
| LOC118947119 | NA | coding | upstream | 95342 | 799163 ~ 800016 (-) |
| LOC110516334 | LOC106594246 | coding | upstream | 151541 | 855362 ~ 958479 (-) |
| LOC110513313 | slc29a4 | coding | upstream | 269920 | 973741 ~ 1003184 (-) |
| LOC110518374 | cpsf4 | coding | upstream | 322924 | 1026745 ~ 1048179 (-) |
| G2339019 | NA | non-coding | downstream | 1160 | 692505 ~ 702324 (-) |
| G2339017 | LOC106595364 | non-coding | downstream | 21767 | 680731 ~ 681717 (-) |
| G2338757 | NA | non-coding | downstream | 29027 | 673690 ~ 674457 (-) |
| G2338756 | NA | non-coding | downstream | 31621 | 671661 ~ 671863 (-) |
| G2338747 | NA | non-coding | downstream | 81371 | 621913 ~ 622113 (-) |
| G2339026 | LOC106591863 | non-coding | upstream | 6591 | 710412 ~ 711989 (-) |
| G2339027 | NA | non-coding | upstream | 8245 | 712066 ~ 713110 (-) |
| G2339072 | NA | non-coding | upstream | 53676 | 757497 ~ 760194 (-) |
| G2339075 | NA | non-coding | upstream | 60007 | 763828 ~ 764623 (-) |
| G2339078 | NA | non-coding | upstream | 84673 | 788494 ~ 789267 (-) |
| G2338752 | NA | other | downstream | 37387 | 663537 ~ 666097 (-) |
| G2338753 | NA | other | downstream | 38799 | 664228 ~ 664685 (-) |
| G2338725 | NA | other | downstream | 133106 | 569827 ~ 570378 (-) |
| G2339043 | LOC102799139 | other | upstream | 135362 | 839183 ~ 844104 (-) |
| G2339109 | NA | other | upstream | 237155 | 940976 ~ 941892 (-) |
| G2339060 | NA | other | upstream | 259328 | 963149 ~ 969154 (-) |
| G2339121 | NA | other | upstream | 294110 | 997931 ~ 1168624 (-) |
