G2338772


Basic Information

Item Value
gene id G2338772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 706549 ~ 706890 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2677347
gacgatgatgatgatgtcagcaTACTAGACgtaacctctgacctctcaccCTGTCCTGGTGTCTGACCagccagatgatgatagcaTACTACTGGTAAcctttaacccctgacctctaaatACTTAATCTAACCCCTGACCTTTAACTAGGGATGCAAATGTTGGTCAATTTTCCTGCCGACGATTCGACCCTCATTAACCGGTTTCTAACGGCTACGTTAACTTATGTTAGAGCCTAATTGAAAGAGGCAACAGTGCAAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2677347 True 263 lncRNA 0.45 2 706549 706890

Neighbor

gene id symbol gene type direction distance location
LOC118947126 rpusd1 coding upstream 13506 679453 ~ 693043 (+)
LOC118947125 NA coding upstream 158121 465511 ~ 562271 (+)
LOC110516853 LOC106579185 coding upstream 269423 301775 ~ 437126 (+)
LOC118947116 fam83g coding upstream 487036 201747 ~ 219513 (+)
grapa LOC106602037 coding upstream 522534 146033 ~ 184015 (+)
LOC110517977 LOC102799139 coding downstream 132256 839146 ~ 843678 (+)
LOC110517915 atp5j2 coding downstream 314936 1021826 ~ 1024705 (+)
LOC118947121 NA coding downstream 319471 1026356 ~ 1028105 (+)
LOC110518375 LOC106595689 coding downstream 345302 1052192 ~ 1074031 (+)
LOC110514212 LOC106591425 coding downstream 372248 1079138 ~ 1147274 (+)
G2338763 NA non-coding upstream 28368 677724 ~ 678181 (+)
G2338761 NA non-coding upstream 29992 676325 ~ 676557 (+)
G2338755 NA non-coding upstream 37444 668860 ~ 669105 (+)
G2338743 NA non-coding upstream 94580 611466 ~ 611969 (+)
G2338741 NA non-coding upstream 97080 609097 ~ 609469 (+)
G2338773 NA non-coding downstream 100 706990 ~ 707310 (+)
G2338774 NA non-coding downstream 1561 708451 ~ 708714 (+)
G2338775 NA non-coding downstream 2901 709791 ~ 710034 (+)
G2338777 NA non-coding downstream 15515 722405 ~ 723638 (+)
G2338790 NA non-coding downstream 39371 746261 ~ 747117 (+)
G2338488 NA other upstream 500321 205182 ~ 206228 (+)
LOC118947124 b9d1 other upstream 659680 40792 ~ 46887 (+)
LOC110511299 LOC106591863 other downstream 7690 703483 ~ 758282 (+)
G2338845 NA other downstream 221472 928362 ~ 929635 (+)

Expression


Co-expression Network