G2338774


Basic Information

Item Value
gene id G2338774
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 708451 ~ 708714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2677349
aatatgaagctgggaggctcctcctcttgttaatcaatatgaagctgagaggctcctcttgttaatcaatatgaagctgggagtctcctcttgttaatcaatatgaagctgggagtctcctcctcttgttaatcaatatgaagctgggagtctcctcctcttgttaatcaatatgaagctgggaggctcctcttgttaatcaatatgaagctgggaggctcctcctcttgttaatcaatatgaagctgggaggctcctcttgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2677349 True 264 lncRNA 0.44 1 708451 708714

Neighbor

gene id symbol gene type direction distance location
LOC118947126 rpusd1 coding upstream 15408 679453 ~ 693043 (+)
LOC118947125 NA coding upstream 160023 465511 ~ 562271 (+)
LOC110516853 LOC106579185 coding upstream 271325 301775 ~ 437126 (+)
LOC118947116 fam83g coding upstream 488938 201747 ~ 219513 (+)
grapa LOC106602037 coding upstream 524436 146033 ~ 184015 (+)
LOC110517977 LOC102799139 coding downstream 130432 839146 ~ 843678 (+)
LOC110517915 atp5j2 coding downstream 313112 1021826 ~ 1024705 (+)
LOC118947121 NA coding downstream 317647 1026356 ~ 1028105 (+)
LOC110518375 LOC106595689 coding downstream 343478 1052192 ~ 1074031 (+)
LOC110514212 LOC106591425 coding downstream 370424 1079138 ~ 1147274 (+)
G2338773 NA non-coding upstream 1141 706990 ~ 707310 (+)
G2338772 NA non-coding upstream 1561 706549 ~ 706890 (+)
G2338763 NA non-coding upstream 30270 677724 ~ 678181 (+)
G2338761 NA non-coding upstream 31894 676325 ~ 676557 (+)
G2338755 NA non-coding upstream 39346 668860 ~ 669105 (+)
G2338775 NA non-coding downstream 1077 709791 ~ 710034 (+)
G2338777 NA non-coding downstream 13691 722405 ~ 723638 (+)
G2338790 NA non-coding downstream 37547 746261 ~ 747117 (+)
G2338796 NA non-coding downstream 51583 760297 ~ 760685 (+)
G2338797 NA non-coding downstream 53357 762071 ~ 762306 (+)
G2338488 NA other upstream 502223 205182 ~ 206228 (+)
LOC118947124 b9d1 other upstream 661582 40792 ~ 46887 (+)
LOC110511299 LOC106591863 other downstream 5866 703483 ~ 758282 (+)
G2338845 NA other downstream 219648 928362 ~ 929635 (+)

Expression


Co-expression Network