G2338775


Basic Information

Item Value
gene id G2338775
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 709791 ~ 710034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2677350
tgttaatcaatatgaagctggAAGACTGTTCGTGTCTACTAACCAAAAATACACATGGCACCAAAATTATGCAAATGAACCTGACCAGTCAAATGCATTTTCAGCGCCTGACCGGTTAATGGTTAGCATCCCAAccttgacctctaacccctgacttGGGATAGGTTTGGAGCTGACTAGGTGACCCGTGTCTAGTCTCTTAACACTGTGTGTTTGTCCTAaccacctgtcctctctctctctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2677350 True 244 lncRNA 0.45 1 709791 710034

Neighbor

gene id symbol gene type direction distance location
LOC118947126 rpusd1 coding upstream 16748 679453 ~ 693043 (+)
LOC118947125 NA coding upstream 161363 465511 ~ 562271 (+)
LOC110516853 LOC106579185 coding upstream 272665 301775 ~ 437126 (+)
LOC118947116 fam83g coding upstream 490278 201747 ~ 219513 (+)
grapa LOC106602037 coding upstream 525776 146033 ~ 184015 (+)
LOC110517977 LOC102799139 coding downstream 129112 839146 ~ 843678 (+)
LOC110517915 atp5j2 coding downstream 311792 1021826 ~ 1024705 (+)
LOC118947121 NA coding downstream 316327 1026356 ~ 1028105 (+)
LOC110518375 LOC106595689 coding downstream 342158 1052192 ~ 1074031 (+)
LOC110514212 LOC106591425 coding downstream 369104 1079138 ~ 1147274 (+)
G2338774 NA non-coding upstream 1077 708451 ~ 708714 (+)
G2338773 NA non-coding upstream 2481 706990 ~ 707310 (+)
G2338772 NA non-coding upstream 2901 706549 ~ 706890 (+)
G2338763 NA non-coding upstream 31610 677724 ~ 678181 (+)
G2338761 NA non-coding upstream 33234 676325 ~ 676557 (+)
G2338777 NA non-coding downstream 12371 722405 ~ 723638 (+)
G2338790 NA non-coding downstream 36227 746261 ~ 747117 (+)
G2338796 NA non-coding downstream 50263 760297 ~ 760685 (+)
G2338797 NA non-coding downstream 52037 762071 ~ 762306 (+)
G2338799 NA non-coding downstream 57810 767844 ~ 768052 (+)
G2338488 NA other upstream 503563 205182 ~ 206228 (+)
LOC118947124 b9d1 other upstream 662922 40792 ~ 46887 (+)
LOC110511299 LOC106591863 other downstream 4546 703483 ~ 758282 (+)
G2338845 NA other downstream 218328 928362 ~ 929635 (+)

Expression


Co-expression Network