Gene
RNA
| Item | Value |
|---|---|
| gene id | G2339096 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 857248 ~ 857780 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sporozoite surface protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2677860 | True | 478 | lncRNA | 0.56 | 2 | 857248 | 857780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517482 | fscn1 | coding | downstream | 48378 | 780766 ~ 808870 (-) |
| LOC118947119 | NA | coding | downstream | 57232 | 799163 ~ 800016 (-) |
| LOC110511701 | traf7 | coding | downstream | 344776 | 446215 ~ 512472 (-) |
| prpsap2 | LOC103393631 | coding | downstream | 563928 | 247351 ~ 293320 (-) |
| LOC110511686 | LOC106591320 | coding | downstream | 739159 | 52434 ~ 118089 (-) |
| LOC110513313 | slc29a4 | coding | upstream | 115961 | 973741 ~ 1003184 (-) |
| LOC110518374 | cpsf4 | coding | upstream | 168965 | 1026745 ~ 1048179 (-) |
| LOC118947123 | NA | coding | upstream | 226192 | 1083692 ~ 1086303 (-) |
| LOC110516784 | smcr8 | coding | upstream | 300272 | 1158052 ~ 1183417 (-) |
| LOC110516509 | llgl1 | coding | upstream | 468888 | 1326668 ~ 1417783 (-) |
| G2339043 | LOC102799139 | non-coding | downstream | 13144 | 839183 ~ 844104 (-) |
| G2339086 | NA | non-coding | downstream | 34264 | 819209 ~ 822984 (-) |
| G2339063 | NA | non-coding | downstream | 41694 | 814084 ~ 815554 (-) |
| G2339078 | NA | non-coding | downstream | 67981 | 788494 ~ 789267 (-) |
| G2339075 | NA | non-coding | downstream | 92625 | 763828 ~ 764623 (-) |
| G2339097 | NA | non-coding | upstream | 4951 | 862731 ~ 863147 (-) |
| G2339099 | NA | non-coding | upstream | 16091 | 873871 ~ 874561 (-) |
| G2339057 | NA | non-coding | upstream | 35508 | 893288 ~ 923607 (-) |
| G2339106 | NA | non-coding | upstream | 46538 | 904318 ~ 905325 (-) |
| G2339110 | NA | non-coding | upstream | 84363 | 942143 ~ 942997 (-) |
| G2339019 | NA | other | downstream | 161396 | 692505 ~ 702324 (-) |
| G2338752 | NA | other | downstream | 191151 | 663537 ~ 666097 (-) |
| G2338753 | NA | other | downstream | 192563 | 664228 ~ 664685 (-) |
| G2338725 | NA | other | downstream | 286870 | 569827 ~ 570378 (-) |
| G2339109 | NA | other | upstream | 83196 | 940976 ~ 941892 (-) |
| G2339060 | NA | other | upstream | 105369 | 963149 ~ 969154 (-) |
| G2339121 | NA | other | upstream | 140151 | 997931 ~ 1168624 (-) |
