G2339060


Basic Information

Item Value
gene id G2339060
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 963149 ~ 969154 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2677813
tctgagaggttgttctgtctagagactgtatatacctgtctgagaggttgttctgtctagagactgtatatacctgtccGAGTGGTTtttctgtctagagactgtatataccggtctgagaggttgttctgtctagagactgtatatacctgtctgagaggttgttctgtctagagactgtatatacctgtctgagaggttgttctgtctagagactgtatatacctgtctgagaggttgttctgtctagagactgtatatacctgtccGAGTGGTTtttctgtctagagactgtatataccggtctgagaggttgttctgtctagagactgtatatacctgtctgagaggttgttctgtctagggtctgagaggttgttctgtctaaGGTCTGAGAGAGCCCCTACCAGCCTGCTAACTTTAGCCCTACAAGCCTGATAACAATAgccctaccagcctgctaacATTAGCCCCTACCAGCCTGATAACATTATCCCCTACCAGCCTGCTAACATTAGCCCCTACCAGCCTGATAACATTAGCCCCTACCAGCCTGATAACATTATCccctaccagcctgctaacgttagcccctaccagcctgctaacgttagcccctaccagcctgctaacgttagcccctaccagcctgctaactttatcccctaccagcctgctaactttagcccctaccagcctgctaacgttagcccctaccagcctgctaactttagccctaccagcctgctaactttagccctaccagcctgctaacATTAGCCCAACCAGCCTGATAACATTTGCCCCTACCAGCCTGATAACATTATCCCCTACCAGCCTGATAACTTTAGCCCCTACCAGCCTGCTAACTTTAGCCCTACCAGCCTACTAACGTTAGCCCCTACCAGCCTGATAACGTTAGCCCCTACCAGCCTGCTAACTTTACCccctaccagcctgctaacgttagcccttACCAGCCTGCTAACGTAAGCCCCTACCAgtctgctaacgttagccctaccatcctgctaacgttagcccctaccagcctgctaacgttagcccctaccagcctgctaacgttagcccctactagcctgctaacgttaaCCCCTACTAGCCTGCTAACTTTAGCCCTACTAGCCTGCTAAAGTTATCACtaccagcctgctaacgttagcccctACTAGCCTGCTAACTTTAGCCCCTACCAGCCTGCTAACATTACGTTAGCACTGAGTGAGTCAGCCAGTTGCTATTAACACCACCTAGCATACAGTTACATTAAAGTAAACCAACGTTttgggttttatgggtattatgactcatactgtggtactccaTAGTGATGTTTCTCCTCTCTGGGTGCAGTTGGTCTGTGTGACCAgcagaggtctctctctctccaacagtgAACTGGACTGAGCTCAGCCTCCAGGGATGCAGTTGGTCTGTGTGACCAgcagaggtctctctctctccaacagtgAACTGGACTGAGCTCGGCCTCCAGGGATGCAGTTTCCTTTCTCCACCCTTCTCACCAAATCCACTCCCAGTCATGGATTTAGAAAATGATGGAGACTCCCTACAGCCAATgctttacaccaatccaatgcttttaaaatCTTTGTCAGGAAACGTGGAAGGGCTTTGGGAGAAGTGGTCCGTGTTGATGCTGATCTGTTCTCACTGGTAGGAACAGAAAGGTAATCCCTACAGGATTACAATGATAATTACATCACACAAATCAATTTATTGTTTAACATTTtggtgggtgtgggggggggggggtgtatatctTACAGAGTGacttcattgattgattgattgaattgatgtcacttattggtcagagagactccaatgctgtctcaggtctgaatctctgctgtgcgccttctaggcagagttgcaaagaaaaatccatatctcagactggccaataaaagagggcaaaagaacacagacactggacagaggaactctgcctagaaggtcagcatccaggagtcgcctcttcactgttgacattgagactggacaTAGGAACTCTGCCTTAGAAGGTcagcatccaggagtcgcctcttcactgttgacgttgagactggacagaggaactctgccttagaaggtcagcatccaggagtcgcctcttcactgttgacgttgagactggacagaggaactctgcctagaaggccagcatccaggagtcgcctcttcactgttgacgttgagactggacagaggaactctgcctagaagGCTGACGGCCTGGGAGGACAGGACTCTCTGCTGACGGCCTGGGAGGACAGGACTCTCTGCTGACGGCCTGGGAGGACAGGACTCTCTGCTGACGGCCTGGGAGGACAGGACTCTCTGCTGACGGCCTGGGAGGACAGGACTCTCTGCTGACGGTCTGGGAGGACAGGACTCTCTGCTGACGGTCTGGGAGGACAGGACTCTCTGCTGACGGTCTGGGAGGACAGGACTCTCTGCTGACGGCCTGGGAGGACAGGACTCTCTGCTGACGGCCTGGGAGGACAGGACTCTCCGCAGCTGCCATCATAACATCTGTTTTATTTCtgcggtacagttgataaccatggcGATGAATGGTAAGAAGCCAACCTTACCGAAGCACACGTTCATATCTCTCTGTGTTGGCCGATGCCTACTATCCATCCTGTACTGTCTCCACTGCCTCAGCAGAGAATACATTCTATTCTAACAACctatttgatttttttatttaactcgacaagtcagttaagaactaaatcttatttacaatgacggtctaggaacagtgggttaactgccttgttcaggggcagaaccacagaaTTTTACCATATAAAGACAGGGACAcgttctagcaacctttcggttactggccctacgctctaaccactaggctgcctgcaggttactggcccaacgctctaaccactaggctgcctgttggttactggcccaacgctctaaccactaggctgcctgttggttactggcccaacgctctaaccactaggcagcctgttggttactggcccaaagctctaaccactagtctacctgctggttactggcccaacgctctaaccactagtctacctgctggttactggcccaacgctctaaccactaggctgcctgttggttactggcccaacgctctaaccactaggctgcctgttggttactggcccaacgctctaaccactaggctgcctgtctctctcacactggGTACTTCTGACCCCCCCCCTCAGCAACatgggcgtacacatcacagacaaactgaattggtccacccacacagacagcatcgtgaagaaggcgcagcagcgcctcttcaacctcaggaggctgaagaaatttgccgtgtcaccaaaagcactcacaaacttctacagatgcacaatcgagagcatcctgtcgggctgtatcaccgcctggtacggcaactgctccgcccagaaccgtaaggctctccagagggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgccctccaggacacctacaccacccgatgtcacaggaaggccataaagatcatcaaggacaacaaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaggtcagtacaggtgcatcaaagctgggaccgagagactgaaaaacagcttctgtctcaaggccatcagactgttaaacagccaccactaacattgagtggctgctgccaacatactgactcaactccagccactttaataatgggaattgatgagaaatgatgtaaatatatcactagccactttaaacaatgctacctaatataatgcttacataccctacattattcatctcatctcatatgtatatactgtactctatatcatctactgcatctttatgtaatacatgtatcactagccactttaactatgccactttgtttacatactcatctcatatgtatatactgcactcaataccatctactgtatcttgcctatgccgctctgtaccatcactcattcatatatctttatgtacatattctttatccccttacacttgtgtgtataaggtagtagttctggaattgttagctagattactcgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgatctgcacATTTGACACAGTTTTTTTCCACCGATACAACACATTCCTTTGTCCCCATGCCCTCctacacacttctcacatctaggaatgtccctcctacacactgctgcaacatgaccataagctTGGCATCTGAAACACCTCAGTGTGTTCGGCACAAAGGCGCTCAGTTGGATAAGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2677813 True 4440 TUCP 0.49 3 963149 969154
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110516334 LOC106594246 coding downstream 4670 855362 ~ 958479 (-)
LOC110517482 fscn1 coding downstream 154279 780766 ~ 808870 (-)
LOC118947119 NA coding downstream 163133 799163 ~ 800016 (-)
LOC110511701 traf7 coding downstream 450677 446215 ~ 512472 (-)
prpsap2 LOC103393631 coding downstream 669829 247351 ~ 293320 (-)
LOC110513313 slc29a4 coding upstream 4587 973741 ~ 1003184 (-)
LOC110518374 cpsf4 coding upstream 57591 1026745 ~ 1048179 (-)
LOC118947123 NA coding upstream 114818 1083692 ~ 1086303 (-)
LOC110516784 smcr8 coding upstream 188898 1158052 ~ 1183417 (-)
LOC110516509 llgl1 coding upstream 357514 1326668 ~ 1417783 (-)
G2339111 NA non-coding downstream 18980 943375 ~ 944169 (-)
G2339110 NA non-coding downstream 20152 942143 ~ 942997 (-)
G2339057 NA non-coding downstream 39542 893288 ~ 923607 (-)
G2339106 NA non-coding downstream 57824 904318 ~ 905325 (-)
G2339099 NA non-coding downstream 88588 873871 ~ 874561 (-)
G2339121 NA non-coding upstream 28777 997931 ~ 1168624 (-)
G2339122 NA non-coding upstream 40901 1010055 ~ 1011683 (-)
G2339123 NA non-coding upstream 41117 1010271 ~ 1010630 (-)
G2339050 atp5j2 non-coding upstream 52798 1021952 ~ 1024681 (-)
G2339133 NA non-coding upstream 68646 1037800 ~ 1040786 (-)
G2339109 NA other downstream 21257 940976 ~ 941892 (-)
G2339043 LOC102799139 other downstream 119045 839183 ~ 844104 (-)
G2339019 NA other downstream 267297 692505 ~ 702324 (-)
G2338752 NA other downstream 297052 663537 ~ 666097 (-)
G2338753 NA other downstream 298464 664228 ~ 664685 (-)
G2339156 NA other upstream 138578 1107732 ~ 1122639 (-)

Expression

G2339060 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 4.
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G2339060 Expression in each Bioproject

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G2339060 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network