Gene
RNA
| Item | Value |
|---|---|
| gene id | G2339121 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 997931 ~ 1168624 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2677894 | False | 626 | lncRNA | 0.37 | 3 | 997931 | 999857 |
| TU2677898 | False | 348 | lncRNA | 0.38 | 3 | 997931 | 999857 |
| TU2677900 | False | 1370 | TUCP | 0.35 | 4 | 997931 | 999857 |
| TU2677899 | False | 1202 | lncRNA | 0.35 | 2 | 1166911 | 1168624 |
| TU2677901 | True | 1007 | lncRNA | 0.35 | 3 | 1166911 | 1168624 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516334 | LOC106594246 | coding | downstream | 39452 | 855362 ~ 958479 (-) |
| LOC110517482 | fscn1 | coding | downstream | 189061 | 780766 ~ 808870 (-) |
| LOC118947119 | NA | coding | downstream | 197915 | 799163 ~ 800016 (-) |
| LOC110511701 | traf7 | coding | downstream | 485459 | 446215 ~ 512472 (-) |
| prpsap2 | LOC103393631 | coding | downstream | 704611 | 247351 ~ 293320 (-) |
| LOC110516509 | llgl1 | coding | upstream | 158044 | 1326668 ~ 1417783 (-) |
| LOC118947127 | LOC106594823 | coding | upstream | 267875 | 1436499 ~ 1488403 (-) |
| G2339111 | NA | non-coding | downstream | 53762 | 943375 ~ 944169 (-) |
| G2339110 | NA | non-coding | downstream | 54934 | 942143 ~ 942997 (-) |
| G2339057 | NA | non-coding | downstream | 74324 | 893288 ~ 923607 (-) |
| G2339106 | NA | non-coding | downstream | 92606 | 904318 ~ 905325 (-) |
| G2339099 | NA | non-coding | downstream | 123370 | 873871 ~ 874561 (-) |
| G2339184 | NA | non-coding | upstream | 17672 | 1186296 ~ 1197554 (-) |
| G2339185 | NA | non-coding | upstream | 27160 | 1195784 ~ 1196260 (-) |
| G2339173 | NA | non-coding | upstream | 33883 | 1202507 ~ 1202890 (-) |
| G2339195 | NA | non-coding | upstream | 51279 | 1219903 ~ 1220512 (-) |
| G2339196 | NA | non-coding | upstream | 51939 | 1220563 ~ 1221550 (-) |
| G2339060 | NA | other | downstream | 28777 | 963149 ~ 969154 (-) |
| G2339109 | NA | other | downstream | 56039 | 940976 ~ 941892 (-) |
| G2339043 | LOC102799139 | other | downstream | 153827 | 839183 ~ 844104 (-) |
| G2339019 | NA | other | downstream | 302079 | 692505 ~ 702324 (-) |
| G2338752 | NA | other | downstream | 331834 | 663537 ~ 666097 (-) |
| G2339202 | NA | other | upstream | 66580 | 1235204 ~ 1235588 (-) |
| G2339205 | NA | other | upstream | 73450 | 1242074 ~ 1243382 (-) |
| LOC110518374 | cpsf4 | coding | upstream | 26888 | 1026745 ~ 1048179 (-) |
| LOC118947123 | NA | coding | upstream | 84115 | 1083692 ~ 1086303 (-) |
| LOC110516784 | smcr8 | coding | upstream | 158195 | 1158052 ~ 1183417 (-) |
| G2339122 | NA | non-coding | upstream | 10198 | 1010055 ~ 1011683 (-) |
| G2339123 | NA | non-coding | upstream | 10414 | 1010271 ~ 1010630 (-) |
| G2339050 | atp5j2 | non-coding | upstream | 22095 | 1021952 ~ 1024681 (-) |
| G2339133 | NA | non-coding | upstream | 37943 | 1037800 ~ 1040786 (-) |
| G2339136 | NA | non-coding | upstream | 45848 | 1045705 ~ 1046314 (-) |
| LOC110513313 | slc29a4 | other | upstream | 1162 | 973741 ~ 1003184 (-) |
| G2339156 | NA | other | upstream | 107875 | 1107732 ~ 1122639 (-) |
