Gene
RNA
| Item | Value |
|---|---|
| gene id | G2339155 |
| gene name | LOC106594472 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 1134422 ~ 1134754 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine hydroxymethyltransferase, cytosolic-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2677962 | True | 298 | lncRNA | 0.58 | 2 | 1134422 | 1134754 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118947123 | NA | coding | downstream | 49639 | 1083692 ~ 1086303 (-) |
| LOC110518374 | cpsf4 | coding | downstream | 86243 | 1026745 ~ 1048179 (-) |
| LOC110513313 | slc29a4 | coding | downstream | 131238 | 973741 ~ 1003184 (-) |
| LOC110516334 | LOC106594246 | coding | downstream | 175943 | 855362 ~ 958479 (-) |
| LOC118947119 | NA | coding | downstream | 334406 | 799163 ~ 800016 (-) |
| LOC110516784 | smcr8 | coding | upstream | 23298 | 1158052 ~ 1183417 (-) |
| LOC110516509 | llgl1 | coding | upstream | 191914 | 1326668 ~ 1417783 (-) |
| LOC118947127 | LOC106594823 | coding | upstream | 301745 | 1436499 ~ 1488403 (-) |
| G2339158 | NA | non-coding | downstream | 13300 | 1111179 ~ 1121122 (-) |
| G2339157 | NA | non-coding | downstream | 29093 | 1097497 ~ 1105329 (-) |
| G2339154 | NA | non-coding | downstream | 43829 | 1090302 ~ 1090593 (-) |
| G2339146 | NA | non-coding | downstream | 55466 | 1075708 ~ 1078956 (-) |
| G2339167 | NA | non-coding | upstream | 1641 | 1136395 ~ 1137043 (-) |
| G2339168 | NA | non-coding | upstream | 2640 | 1137394 ~ 1138351 (-) |
| G2339172 | NA | non-coding | upstream | 10763 | 1145517 ~ 1149117 (-) |
| G2339176 | NA | non-coding | upstream | 16059 | 1150813 ~ 1155809 (-) |
| G2339156 | NA | other | downstream | 11783 | 1107732 ~ 1122639 (-) |
| G2339121 | NA | other | downstream | 134565 | 997931 ~ 1168624 (-) |
| G2339060 | NA | other | downstream | 165268 | 963149 ~ 969154 (-) |
| G2339202 | NA | other | upstream | 100450 | 1235204 ~ 1235588 (-) |
| G2339205 | NA | other | upstream | 107320 | 1242074 ~ 1243382 (-) |
