Gene
RNA
| Item | Value |
|---|---|
| gene id | G2339198 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 1222396 ~ 1222763 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| DNA topoisomerase 3-alpha-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2678046 | True | 298 | lncRNA | 0.48 | 2 | 1222396 | 1222763 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516784 | smcr8 | coding | downstream | 38979 | 1158052 ~ 1183417 (-) |
| LOC118947123 | NA | coding | downstream | 137613 | 1083692 ~ 1086303 (-) |
| LOC110518374 | cpsf4 | coding | downstream | 174217 | 1026745 ~ 1048179 (-) |
| LOC110513313 | slc29a4 | coding | downstream | 219212 | 973741 ~ 1003184 (-) |
| LOC110516334 | LOC106594246 | coding | downstream | 263917 | 855362 ~ 958479 (-) |
| LOC110516509 | llgl1 | coding | upstream | 103905 | 1326668 ~ 1417783 (-) |
| LOC118947127 | LOC106594823 | coding | upstream | 213736 | 1436499 ~ 1488403 (-) |
| G2339197 | NA | non-coding | downstream | 109 | 1221654 ~ 1222287 (-) |
| G2339196 | NA | non-coding | downstream | 846 | 1220563 ~ 1221550 (-) |
| G2339195 | NA | non-coding | downstream | 1884 | 1219903 ~ 1220512 (-) |
| G2339173 | NA | non-coding | downstream | 19506 | 1202507 ~ 1202890 (-) |
| G2339184 | NA | non-coding | downstream | 24842 | 1186296 ~ 1197554 (-) |
| G2339203 | NA | non-coding | upstream | 13988 | 1236751 ~ 1237019 (-) |
| G2339208 | NA | non-coding | upstream | 21040 | 1243803 ~ 1306412 (-) |
| G2339215 | NA | non-coding | upstream | 27151 | 1249914 ~ 1250808 (-) |
| G2339211 | NA | non-coding | upstream | 29071 | 1251834 ~ 1252101 (-) |
| G2339221 | NA | non-coding | upstream | 34903 | 1257666 ~ 1258285 (-) |
| G2339156 | NA | other | downstream | 99757 | 1107732 ~ 1122639 (-) |
| G2339121 | NA | other | downstream | 222539 | 997931 ~ 1168624 (-) |
| G2339202 | NA | other | upstream | 12441 | 1235204 ~ 1235588 (-) |
| G2339205 | NA | other | upstream | 19311 | 1242074 ~ 1243382 (-) |
