G2338941


Basic Information

Item Value
gene id G2338941
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1242465 ~ 1243783 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2677644
gacctatagactgCCTGATTACACATGGAAGTAGACCTATAtactacctgattacacatagaagtagacctatagactacctgGCCCTGATTACACatggaagtagacctatagactacctgattacacatggaagtagacctatagactacctggccctgattacacatagaagtagacctatagactacctgattacacatagaagtagacctatagactacctggccctgattacacatagaagtagacctatatactacctgattacacatagaagtagacctatagactacctgtacctgaTTACACATGGAAGTAGACCTATATACTACCTggccctgattacacatagaagcaGGTTTATAAATGTGTCCGTTTTGGGATCTGATACTTCTTCTGATTTGGCTCAACTTTCCACCACTAATGAGAAGGTTTTCCTCACCTCAATCAGCAAGTAAATGAAGTCTGTTTTTATATCTATTGAGAATGATTAGTTCCtcaacgttgtgtgtgtgtgtgtg

Function

NR:

description
PREDICTED: trichohyalin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2677644 True 524 lncRNA 0.40 2 1242465 1243783

Neighbor

gene id symbol gene type direction distance location
LOC110516858 top3a coding upstream 5333 1183511 ~ 1237132 (+)
LOC110514212 LOC106591425 coding upstream 95191 1079138 ~ 1147274 (+)
LOC118947122 NA coding upstream 103436 1137484 ~ 1139029 (+)
LOC110518375 LOC106595689 coding upstream 168434 1052192 ~ 1074031 (+)
LOC118947121 NA coding upstream 215007 1026356 ~ 1028105 (+)
G2338938 NA non-coding upstream 20135 1221021 ~ 1222330 (+)
G2338937 NA non-coding upstream 21971 1220226 ~ 1220494 (+)
G2338930 NA non-coding upstream 53164 1188461 ~ 1189301 (+)
G2338929 NA non-coding upstream 54593 1187157 ~ 1187872 (+)
G2338944 NA non-coding downstream 6324 1250107 ~ 1250742 (+)
G2338945 NA non-coding downstream 13884 1257667 ~ 1258571 (+)
G2338948 NA non-coding downstream 27814 1271597 ~ 1272782 (+)
G2338957 NA non-coding downstream 82910 1326693 ~ 1328434 (+)
G2338970 NA non-coding downstream 96320 1340103 ~ 1340440 (+)
LOC110517915 atp5j2 other upstream 217762 1021826 ~ 1024705 (+)
G2338845 NA other upstream 312830 928362 ~ 929635 (+)
LOC110511299 LOC106591863 other upstream 484410 703483 ~ 758282 (+)
LOC118947126 rpusd1 other upstream 549829 679453 ~ 693043 (+)
LOC118947125 NA other upstream 689943 465511 ~ 562271 (+)

Expression

G2338941 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G2338941 Expression in each Bioproject

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G2338941 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network