G2339208


Basic Information

Item Value
gene id G2339208
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1243803 ~ 1306412 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678057
tgtgtgtacctcCAGTTTCCCAGGGAAGAGACTCTCAAACTTCTTCTGCAGAGAGAAGGTGAAGGTGAGCCAGCCCATGTTGGAGGCCTGCCGGCCCTGCCAGAAATACACAACACACTGGAAGtcttcctccaccctctcctcctcctcttcctctcctccgtGGTGGCCGtgtctctccttcttctccttgtcCTCATCGTCGTATTCTACTGGCACCcaatacctacacacacacacacacacgcacacacacacacacacacacacacacac
>TU2678061
ggagggtctctctccaggaacagggtaggagttaaaacctccaggagggtctctctccaggaacagggttggagttaaaacctccaggagggtatgtctccaggaacagggttggagttaaaacctacaggagggtttctctccaggaacagggtaggagttaaaacctacaggagggtatgtctccaggaacagggtaggagttaaaacctacaggagggtttctctccaggaacagggtaggagttaaaacctccaggagggtatCTGCCTACCTGACACTCTGTCCCCTCCAGGTTCCTGGTAACAGTAGCGTGTTTGGGGCGGTGCAGCATAGTGCAGACTtcctgtcctagcttcagggcgGCTGCTCTCACAAGACGAGGAGACTTCCTCCCAATCCAGATAAACACATCAGACAGACAGTCCAGGATGTACACTCCCTTAGTGTCCAGCAGGGTCTGGagCAGTCGTAGTTCCGGCAGTTTGTCCAGTTTGACCTTCTCTTTGTGTTCCACTGACAGCTTGTAGTTGATTTGAGGGAGCTCCAGAtatcccagacccagacccacCTTGTATAGTTTGGGTCGTACGGGTGTGAAGTCATCAGGGACGTGTTTGCGTATCTCTTCAGGTTGTCCTCCCAGCACCTCCCAGAAGTTAGGAGGTTCCTGACTCTGCTGCAGGGTGGTGATCTCTGCCTTCCCCTTACGCTCGTTCTTATTGATCTTCTCTGCaaacagcCGGGCCTTAGTGGTACCGGCCAGAGTAGCGTTGGCTCCTCTCCAGATGAGAATCTCCAGACCCGTATCCACCAGGAAGACAAACCGTGGGTCCAGGGACGAGGCCTTCAGAGGAACCGACTCCAGACGGATGTTCTTCTTCCCATAAACACGATAcaacctgacagtatagtgtgtGTCCTCCACAGTATAGAAGCCGCTGGCTGTCCCCCCCTCAATGTAGGAGATGTCATTTTCAAACACAGCGCTGAACTCCTCAGACtcgtctcccatctcctctctgatGGTTCGACACTCCGCCCCCAGGTAGTTACGGAGGTTGACGGCGTGGATGGCAGACCCCGCCTTCTTATCCAGCGTAGCTTCCTGACCGATCCAGTAGAATATCTGCCAGTTCAGGGCTCCGTTGTCGTCCAGGAACGTcttGAGGATGATGTAGCAGTCAGCCTCGTAGAACTTCCCCTGGAACGCCTCGTCTACCTGCATCGGAACAAAGTTCTCTATctgccacacaaacacaccaggaacCTGTCCTACGTCCTCCATGAAGAACTCGGAGTAGTCCAGCTGTGGTTTCTCCAGACTCTTGTCCCAACGACGCGTGTGTCCCAACGATGCATTCAGTTCACCATACTTCTGATCGCCgttctcCTCGAAACTCTTGTTCTTCTCTTGTGTGACATCACTCATCCCCTTGAGGACCTGTTTAGCTTGGTCGTCTTGACTActgtccttcctcctcctcagcctcATCTTCCTCGCCAGGGGGTCCCGTGGGCTggccgctacacacacacacaaaatgtattGAGCGTTTCTAAAGCAAGTCAGTGCATTTCTCTGTCTGGTCCACAGACAGGTCTGGATGGACAGAGTATCAGTGTgtagcagtggg

Function

NR:

description
PREDICTED: protein flightless-1 homolog

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678057 False 276 lncRNA 0.54 2 1243803 1306412
TU2678061 True 1638 lncRNA 0.53 10 1254434 1271684

Neighbor

gene id symbol gene type direction distance location
LOC110516784 smcr8 coding downstream 60386 1158052 ~ 1183417 (-)
LOC118947123 NA coding downstream 159020 1083692 ~ 1086303 (-)
LOC110518374 cpsf4 coding downstream 195624 1026745 ~ 1048179 (-)
LOC110513313 slc29a4 coding downstream 240619 973741 ~ 1003184 (-)
LOC110516334 LOC106594246 coding downstream 285324 855362 ~ 958479 (-)
LOC110516509 llgl1 coding upstream 20256 1326668 ~ 1417783 (-)
LOC118947127 LOC106594823 coding upstream 130087 1436499 ~ 1488403 (-)
G2339203 NA non-coding downstream 6784 1236751 ~ 1237019 (-)
G2339199 NA non-coding downstream 20765 1222692 ~ 1223038 (-)
G2339198 NA non-coding downstream 21040 1222396 ~ 1222763 (-)
G2339197 NA non-coding downstream 21516 1221654 ~ 1222287 (-)
G2339196 NA non-coding downstream 22253 1220563 ~ 1221550 (-)
G2339209 flii non-coding upstream 7555 1313967 ~ 1314457 (-)
G2339233 NA non-coding upstream 36445 1342857 ~ 1343631 (-)
G2339237 NA non-coding upstream 50141 1356553 ~ 1357779 (-)
G2339238 NA non-coding upstream 52582 1358994 ~ 1359370 (-)
G2339205 NA other downstream 421 1242074 ~ 1243382 (-)
G2339202 NA other downstream 8215 1235204 ~ 1235588 (-)
G2339156 NA other downstream 121164 1107732 ~ 1122639 (-)

Expression


Co-expression Network