Fish Transcriptome and Expression Database

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economic fish

G2339221

Basic Information

Item	Value
gene id	G2339221
gene name	NA
gene type	non-coding
species	rainbow trout (Oncorhynchus mykiss)
category of species	economic fish

Chromosome Information

Item	Value
chromosome id	NW_023493664.1
NCBI id	JAAXML020000507.1
chromosome length	1504970
location	1257666 ~ 1258285 (-)
genome version	USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678080
AGGGCAAACCTCAACAGTActgtgctgctagctagctagttttctATACACTTTACAGGGCAAACCTCAACAGTACTGTGCTGCTAGCTAGCATGTTTTCTATACACTTTACAGGGCAAACCTCAACAGTACTGTGCTGCTAGCTAGCTAGCATGTTTTCTATACACTTTACAGGACAAACCTCAACAGTActgtgctgctagctagctagttttctATACACTTTACAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU2678080	True	232	lncRNA	0.43	2	1257666	1258285

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
LOC110516784	smcr8	coding	downstream	74249	1158052 ~ 1183417 (-)
LOC118947123	NA	coding	downstream	172883	1083692 ~ 1086303 (-)
LOC110518374	cpsf4	coding	downstream	209487	1026745 ~ 1048179 (-)
LOC110513313	slc29a4	coding	downstream	254482	973741 ~ 1003184 (-)
LOC110516334	LOC106594246	coding	downstream	299187	855362 ~ 958479 (-)
LOC110516509	llgl1	coding	upstream	68383	1326668 ~ 1417783 (-)
LOC118947127	LOC106594823	coding	upstream	178214	1436499 ~ 1488403 (-)
G2339211	NA	non-coding	downstream	5565	1251834 ~ 1252101 (-)
G2339215	NA	non-coding	downstream	6858	1249914 ~ 1250808 (-)
G2339203	NA	non-coding	downstream	20647	1236751 ~ 1237019 (-)
G2339199	NA	non-coding	downstream	34628	1222692 ~ 1223038 (-)
G2339198	NA	non-coding	downstream	34903	1222396 ~ 1222763 (-)
G2339223	NA	non-coding	upstream	13875	1272160 ~ 1272818 (-)
G2339209	flii	non-coding	upstream	55682	1313967 ~ 1314457 (-)
G2339233	NA	non-coding	upstream	84572	1342857 ~ 1343631 (-)
G2339237	NA	non-coding	upstream	98268	1356553 ~ 1357779 (-)
G2339205	NA	other	downstream	14284	1242074 ~ 1243382 (-)
G2339202	NA	other	downstream	22078	1235204 ~ 1235588 (-)
G2339156	NA	other	downstream	135027	1107732 ~ 1122639 (-)

Expression

Co-expression Network