Gene
RNA
| Item | Value |
|---|---|
| gene id | G2339246 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 1387851 ~ 1389514 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: interphotoreceptor matrix proteoglycan 2-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2678115 | False | 416 | lncRNA | 0.36 | 2 | 1387851 | 1388362 |
| TU2678116 | True | 416 | lncRNA | 0.36 | 2 | 1387851 | 1389514 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516784 | smcr8 | coding | downstream | 204434 | 1158052 ~ 1183417 (-) |
| LOC118947123 | NA | coding | downstream | 303068 | 1083692 ~ 1086303 (-) |
| LOC110518374 | cpsf4 | coding | downstream | 339672 | 1026745 ~ 1048179 (-) |
| LOC110513313 | slc29a4 | coding | downstream | 384667 | 973741 ~ 1003184 (-) |
| LOC110516334 | LOC106594246 | coding | downstream | 429372 | 855362 ~ 958479 (-) |
| LOC118947127 | LOC106594823 | coding | upstream | 46985 | 1436499 ~ 1488403 (-) |
| G2339243 | NA | non-coding | downstream | 4899 | 1381967 ~ 1382952 (-) |
| G2339239 | NA | non-coding | downstream | 25958 | 1360926 ~ 1361893 (-) |
| G2339238 | NA | non-coding | downstream | 28481 | 1358994 ~ 1359370 (-) |
| G2339237 | NA | non-coding | downstream | 30072 | 1356553 ~ 1357779 (-) |
| G2339233 | NA | non-coding | downstream | 44220 | 1342857 ~ 1343631 (-) |
| G2339250 | NA | non-coding | upstream | 820 | 1390334 ~ 1393003 (-) |
| G2339253 | NA | non-coding | upstream | 14388 | 1403902 ~ 1406656 (-) |
| G2339258 | NA | non-coding | upstream | 28875 | 1418389 ~ 1421502 (-) |
| G2339263 | NA | non-coding | upstream | 33157 | 1422671 ~ 1422910 (-) |
| G2339267 | NA | non-coding | upstream | 37617 | 1427131 ~ 1427820 (-) |
| G2339205 | NA | other | downstream | 144469 | 1242074 ~ 1243382 (-) |
| G2339202 | NA | other | downstream | 152263 | 1235204 ~ 1235588 (-) |
| G2339156 | NA | other | downstream | 265212 | 1107732 ~ 1122639 (-) |
