G2339253


Basic Information

Item Value
gene id G2339253
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1403902 ~ 1406656 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678128
GATAATAGTAGTGGTGAAATGGGATCAGGGCTGAGTAAGGCATcaatgataatagtagtagtgaaATGGGATCAGTTCTGAGTAAGGTAGTAGTGAAATAGGATTAGGTCTGAGTAAGGAATCAATGATAATAGTGGTTAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGTCTGAGTAAGGTAGTAGTGAAATGGGATCAGGGCTGAGTAAGGCATCAATGATAATAGTAGTGATGAAATGGGATCAGGTCTGAGTAAAGTAGTAGTGAAATGGGATTAGGTCTGAGGAAGGTAGTAGTGAAATGGGATTAGGTCTGAGGAAGGTAGTAGTGAAATGGGATTAGGTCTGAGGAAGGTAGTAGTGAAATGGGATTAGGTCTGAGTAAGGCATCAATGATAATAGTAGTGGTGAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGGCTGAGTAAGGTAGTGGTGAAATGGGATTAGGTCTGAGTAAGGTAGTAGTGAAATGGGATCAGGTCTGAGTAAGGTAGTGGTGAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGG
>TU2678131
ATGATAATAGTAGTGATGAAATGGGATCAGGGCTGAGTAAGGTAGTAGTGAAATGGGATTAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGTCTGAGGAAGGTAGTAGTGAAATGGGATTAGGTCTGAGGAAGGTAGTAGTGAAATGGGATTAGGTCTGAGTAAGGCATCAATGATAATAGTAGTGGTGAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGGCTGAGTAAGGTAGTGGTGAAATGGGATTAGGTCTGAGTAAGGTAGTAGTGAAATGGGATCAGGTCTGAGTAAGGTAGTGGTGAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGG
>TU2678130
GATAATAGTAGTGGTGAAATGGGATCAGGGCTGAGTAAGGCATcaatgataatagtagtagtgaaATGGGATCAGTTCTGAGTAAGGTAGTAGTGAAATAGGATTAGGTCTGAGTAAGGAATCAATGATAATAGTGGTTAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGTCTGAGTAAGGTAGTAGTGAAATGGGATCAGGGCTGAGTAAGGCATCAATGATAATAGTAGTGATGAAATGGGATCAGGTCTGAGTAAGGTAGTAGTGAAATGGGATTAGGTCTGAGGAAGGTAGTAGTGAAATGGGATTGGATCTGAGTAAAGCATAAAttataatggtagtagtagtgaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678128 False 598 lncRNA 0.41 4 1403902 1406656
TU2678131 False 398 lncRNA 0.42 3 1403902 1405370
TU2678130 True 368 lncRNA 0.39 3 1405810 1406656

Neighbor

gene id symbol gene type direction distance location
LOC110516784 smcr8 coding downstream 220485 1158052 ~ 1183417 (-)
LOC118947123 NA coding downstream 319119 1083692 ~ 1086303 (-)
LOC110518374 cpsf4 coding downstream 355723 1026745 ~ 1048179 (-)
LOC110513313 slc29a4 coding downstream 400718 973741 ~ 1003184 (-)
LOC110516334 LOC106594246 coding downstream 445423 855362 ~ 958479 (-)
LOC118947127 LOC106594823 coding upstream 29843 1436499 ~ 1488403 (-)
G2339250 NA non-coding downstream 10899 1390334 ~ 1393003 (-)
G2339246 NA non-coding downstream 14388 1387851 ~ 1389514 (-)
G2339243 NA non-coding downstream 20950 1381967 ~ 1382952 (-)
G2339239 NA non-coding downstream 42009 1360926 ~ 1361893 (-)
G2339238 NA non-coding downstream 44532 1358994 ~ 1359370 (-)
G2339258 NA non-coding upstream 11733 1418389 ~ 1421502 (-)
G2339263 NA non-coding upstream 16015 1422671 ~ 1422910 (-)
G2339267 NA non-coding upstream 20475 1427131 ~ 1427820 (-)
G2339268 NA non-coding upstream 23635 1430291 ~ 1430571 (-)
G2339288 NA non-coding upstream 43841 1450497 ~ 1451872 (-)
G2339205 NA other downstream 160520 1242074 ~ 1243382 (-)
G2339202 NA other downstream 168314 1235204 ~ 1235588 (-)
G2339156 NA other downstream 281263 1107732 ~ 1122639 (-)

Expression


Co-expression Network