Gene
RNA
| Item | Value |
|---|---|
| gene id | G2339272 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NW_023493664.1 |
| NCBI id | JAAXML020000507.1 |
| chromosome length | 1504970 |
| location | 1444911 ~ 1446743 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2678166 | False | 429 | lncRNA | 0.46 | 3 | 1444911 | 1446743 |
| TU2678165 | False | 324 | lncRNA | 0.46 | 3 | 1445545 | 1446743 |
| TU2678164 | True | 324 | lncRNA | 0.46 | 2 | 1446096 | 1446743 |
1,443,200
1,443,600
1,444,000
1,444,400
1,444,800
1,445,200
1,445,600
1,446,000
1,446,400
1,446,800
1,447,200
1,447,600
1,448,000
1,448,400
1,448,800
1,449,200
1,449,600
1,450,000
1,450,400
1,450,800
NW_023493664.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517072 | flii | coding | upstream | 124971 | 1237783 ~ 1319940 (+) |
| LOC110516858 | top3a | coding | upstream | 207779 | 1183511 ~ 1237132 (+) |
| LOC110514212 | LOC106591425 | coding | upstream | 297637 | 1079138 ~ 1147274 (+) |
| LOC118947122 | NA | coding | upstream | 305882 | 1137484 ~ 1139029 (+) |
| LOC110518375 | LOC106595689 | coding | upstream | 370880 | 1052192 ~ 1074031 (+) |
| G2339264 | NA | non-coding | upstream | 20569 | 1423556 ~ 1424342 (+) |
| G2339009 | NA | non-coding | upstream | 28913 | 1413703 ~ 1415998 (+) |
| G2339000 | NA | non-coding | upstream | 53532 | 1390334 ~ 1391379 (+) |
| G2338997 | NA | non-coding | upstream | 55396 | 1383163 ~ 1389515 (+) |
| G2338999 | NA | non-coding | upstream | 59635 | 1384612 ~ 1385276 (+) |
| G2339276 | NA | non-coding | downstream | 13302 | 1460045 ~ 1460780 (+) |
| G2339278 | NA | non-coding | downstream | 18796 | 1465539 ~ 1466482 (+) |
| G2339279 | NA | non-coding | downstream | 20305 | 1467048 ~ 1470775 (+) |
| G2339282 | NA | non-coding | downstream | 25890 | 1472633 ~ 1476700 (+) |
| LOC110517915 | atp5j2 | other | upstream | 420208 | 1021826 ~ 1024705 (+) |
| G2338845 | NA | other | upstream | 515276 | 928362 ~ 929635 (+) |
| LOC110511299 | LOC106591863 | other | upstream | 686856 | 703483 ~ 758282 (+) |
| LOC118947126 | rpusd1 | other | upstream | 752275 | 679453 ~ 693043 (+) |
| LOC118947125 | NA | other | upstream | 892389 | 465511 ~ 562271 (+) |
