G2339288


Basic Information

Item Value
gene id G2339288
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1450497 ~ 1451872 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678205
gggtcgaactgcagtcaggtccagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtccagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtccagaccctggtgagggtcgaactgcagtcaggtccagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggaGACCCTGGTGAGGGTCGAACTGCAGTCTGGTGGAGACCCTGGTGAgggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtccagaccctggtgagggtcgaactgcagtcaggtccagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtccagACCCTGGTGAGGGTCTAACTGCAGTCAGgtggagaccctggtgagggtcaaactgcagtcaggtggagaccctggtgagggtcgaactgcagtcaggtggaGACCCTGGTGAGGGTTGAACTGCAGTCTGGTGGAGACCCTGGTGAgggtcgaactgcagtcaggtccagACCCTGGTGAGGGTCTAACTGCAGTCAGGTGGAGACCCTGGTGAGGGTCGAACTGCAGTCTGATGGAGACCCTGGTAAGGGTCGAACTACAGTCTGGTGGAGACCCTGGTGAGGGTAACGAGCACACAGATGACCTTCCCTGAGATGATTTATGGacgtttgtgcagaaattcttgggttgtgcaaacctacagtt

Function

NR:

description
DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678205 True 1138 lncRNA 0.60 2 1450497 1451872

Neighbor

gene id symbol gene type direction distance location
LOC110516509 llgl1 coding downstream 32714 1326668 ~ 1417783 (-)
LOC110516784 smcr8 coding downstream 267080 1158052 ~ 1183417 (-)
LOC118947123 NA coding downstream 365714 1083692 ~ 1086303 (-)
LOC110518374 cpsf4 coding downstream 402318 1026745 ~ 1048179 (-)
LOC110513313 slc29a4 coding downstream 447313 973741 ~ 1003184 (-)
G2339268 NA non-coding downstream 19926 1430291 ~ 1430571 (-)
G2339267 NA non-coding downstream 22677 1427131 ~ 1427820 (-)
G2339263 NA non-coding downstream 27587 1422671 ~ 1422910 (-)
G2339258 NA non-coding downstream 28995 1418389 ~ 1421502 (-)
G2339253 NA non-coding downstream 43841 1403902 ~ 1406656 (-)
G2339291 NA non-coding upstream 13582 1465454 ~ 1466490 (-)
G2339292 NA non-coding upstream 14982 1466854 ~ 1471138 (-)
G2339293 NA non-coding upstream 15185 1467057 ~ 1470739 (-)
G2339205 NA other downstream 207115 1242074 ~ 1243382 (-)
G2339202 NA other downstream 214909 1235204 ~ 1235588 (-)
G2339156 NA other downstream 327858 1107732 ~ 1122639 (-)

Expression


Co-expression Network