G2339278


Basic Information

Item Value
gene id G2339278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493664.1
NCBI id JAAXML020000507.1
chromosome length 1504970
location 1465539 ~ 1466482 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2678174
CTCAACCCAACACTTAACGACctcaacccaacacctagcgatCTCAACCCAGCACCTAGCGACctcaacccaacacctagcgtcctcaacccaacacctagcgtcctcaacccaacacctagcgTCCCCAACCCAACACTTAACGATctcaacccaacacctagcgatctcaacccaacacctagcgacctctacccaacacctagcgacctctacccaacacctagcgacctctacccaacacctagcgacctctacccaacacctagcgacctctacccaacacctagcgacctcaacccaacacctagcgacctcaacccaacacctagcccaacacctagcgacctcaacccaacacctagcgatctcaacccaacacctagcgatctcaacccaacacctagcgacctcaacccaacacctagcgaccacaacccaacacctagcgacctcaacccaacacctagcgacctcaacccaacacctagcgacctctacccaacac

Function

NR:

description
PREDICTED: hyphally regulated cell wall protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2678174 True 508 lncRNA 0.56 2 1465539 1466482
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110517072 flii coding upstream 145599 1237783 ~ 1319940 (+)
LOC110516858 top3a coding upstream 228407 1183511 ~ 1237132 (+)
LOC110514212 LOC106591425 coding upstream 318265 1079138 ~ 1147274 (+)
LOC118947122 NA coding upstream 326510 1137484 ~ 1139029 (+)
LOC110518375 LOC106595689 coding upstream 391508 1052192 ~ 1074031 (+)
G2339276 NA non-coding upstream 4759 1460045 ~ 1460780 (+)
G2339272 NA non-coding upstream 18796 1444911 ~ 1446743 (+)
G2339264 NA non-coding upstream 41197 1423556 ~ 1424342 (+)
G2339009 NA non-coding upstream 49541 1413703 ~ 1415998 (+)
G2339000 NA non-coding upstream 74160 1390334 ~ 1391379 (+)
G2339279 NA non-coding downstream 566 1467048 ~ 1470775 (+)
G2339282 NA non-coding downstream 6151 1472633 ~ 1476700 (+)
LOC110517915 atp5j2 other upstream 440836 1021826 ~ 1024705 (+)
G2338845 NA other upstream 535904 928362 ~ 929635 (+)
LOC110511299 LOC106591863 other upstream 707484 703483 ~ 758282 (+)
LOC118947126 rpusd1 other upstream 772903 679453 ~ 693043 (+)
LOC118947125 NA other upstream 913017 465511 ~ 562271 (+)

Expression

G2339278 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
End of interactive chart.

G2339278 Expression in each Bioproject

Bar chart with 8 bars.
G2339278 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 80.
End of interactive chart.

Co-expression Network