trnaa-ugc-227



Basic Information


Item Value
gene id trnaa-ugc-227
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 109160 ~ 109231 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaa-ugc-227
ggggatgtagctcagcggTAGAgtgcatgctttgcatgtatgaggtcctgggttcaatccccagcttctcca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-227 True 72 mRNA 0.54 1 109160 109231
Loading

Neighbor


gene id symbol gene type direction distance location
trnat-ugu-57 NA coding downstream 392 108697 ~ 108768 (-)
trnaa-cgc-20 NA coding downstream 1962 107127 ~ 107198 (-)
trnat-ugu-56 NA coding downstream 2425 106664 ~ 106735 (-)
trnaa-ugc-226 NA coding downstream 9213 99876 ~ 99947 (-)
trnat-ugu-55 NA coding downstream 9676 99413 ~ 99484 (-)
trnat-ugu-58 NA coding upstream 1499 110730 ~ 110801 (-)
trnaa-ugc-228 NA coding upstream 1962 111193 ~ 111264 (-)
trnat-ugu-59 NA coding upstream 3536 112767 ~ 112838 (-)
trnaa-cgc-21 NA coding upstream 3999 113230 ~ 113301 (-)
LOC110514508 LOC106595224 coding upstream 4969 114200 ~ 116716 (-)
G2340432 NA non-coding downstream 35024 73281 ~ 74136 (-)
G2340415 NA non-coding downstream 49891 56226 ~ 59269 (-)
G2340430 NA non-coding downstream 53068 55867 ~ 56092 (-)
G2340418 NA non-coding downstream 57969 48157 ~ 51191 (-)
G2340410 NA non-coding downstream 70556 29438 ~ 38604 (-)
G2340455 NA non-coding upstream 76119 185350 ~ 185775 (-)
G2340457 NA non-coding upstream 77533 186764 ~ 187083 (-)
G2340479 NA non-coding upstream 195770 305001 ~ 305334 (-)
G2340518 NA non-coding upstream 246225 355456 ~ 355819 (-)
trnat-ugu-71 NA non-coding upstream 297619 406850 ~ 407547 (-)
G2340407 NA other downstream 46022 62414 ~ 63138 (-)
G2340905 NA other upstream 697659 806890 ~ 814655 (-)
G2340951 NA other upstream 769578 878809 ~ 929132 (-)
G2341053 NA other upstream 1049367 1158598 ~ 1164054 (-)

Expression


trnaa-ugc-227 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: -0.5 to 0.5.
End of interactive chart.

Co-expression Network