LOC118947148


Basic Information

Item Value
gene id LOC118947148
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 342502 ~ 353584 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041791.1
TATACGTTTTACATTAGGACCGTTGGTGAAGAAAGTTATAAAAGAAGACGACAAAACGAGAACAAAACCCATACCTACTAAGACATGAAGGGAAATGCCGATTTTATAAGAGAGTTGTTATAATTTTGTTAAGACTTAGTAAAGACTGAAGCTACCGTCTCATCGTGGAGGTATTTGACAGCCTTGAGGTTAGCCTAGCATCGTGTAACACCGAGAGATAATTGGTTGGGAAAGCTTAACGAGTTCGTGTTCCCATGGGATATCGGTTACGGCTAAGGAGTACTGTCTGCTTTGATAGCGGTGCTTGCTGTGGATGTTGTGAGGAAACCTGCAAGGAACTGCCATACTTCGCTGAAGGAATATCTACAAGTAGTGAGTAATCACAACGTGAGGTGCTTCTGGACTTTGTGTGTCGTCGGTTTTTTAAGCTCCAACGGGTTATTAAACTTGAAATAATTTAGACATGGGTTGTGCACGACTCACTGGGGTTTAtagtctttatttatttttaatgttGTGCTATGAAAATGTAATACACATATTGAACCTTATGTATCTTTCCTTGGTGGAGTCATTTACTGTTTCAATTTAATTGAATGTATGGGATAGCCTATCCTGATACAATAACAGAAACCTATAATTTCATCTGAAGTTAATACCCTGTTGTCATCACCCTAGACAGTTTACAATAGGAATTCTTATTGGAGATGTCCTTCCCACATAGCATCCCATGCTGTTGAGATACTCTACATAAGTTAATAATGTGAGAGTCATATTCGAGCCTGGTGAGAGTTCTTGGCCTAACCACAGGGGTTACTTGaaaagactcatgagaccataggcctactggtaaaatgcacatgagggggtacttcaggcagagcaaaattcagttggtggtacagtaaccaaaaaagttgggaaccactggtataGCCTATGCGCACGGTtgactgtctctctgcctgcccgATCCTCACTCTCCCTGGCCTGCTCTCTTTATGAAAAACGCTAGTGTGCGTTTCTCTTCGGTCTGTTGCGTGTTGAATAGCTCAGCATACTCATTGATAGCCCTTACTTTAGTGAACTTGCACGAGACATTGCAAGCCAAGAAATTGCACAATACATAATTTCAATACCCTATTGTTTTGTTTTGCACACTTCGTACAaaataatacaatgcagtactacaggatatttcttaacgtAACTCTTTATTAGTTAGCTATAACAGGCATGTTCACATATCGCCAACCAGGATCAATCTGCCATGACCTAACCAtttgggtggtcttaaccaatcatagcacagtatgataTGGCGGTAAAATGCGTCCAATTACAATTCCgtatgtttacacatatgaaTAGTACATCCCCCTTCTTTTAAAACAAAAGAAGTGTTTACATATTCTAAGGGTTTCTTTTGAATACATGCTCTGTAGTTTGATCTCAAGGTAGGTAACCATTTATATTGCATACTACACCAACTGATTCAACAGACTCAAACAATAATCCAACATACTGTTACTTTTCAAACAAGGGATTCTCAGCAACTCAGCTTTCACTGTAGAAATAACATCTTAACATTTCAAACCACTACAATACCAAAGCATTTCAAGTGAACTTTCAATAACAAGTTTACAGTCTGCAACTCTTTTAGGGCAGCGATCCGCCTACACCCTTTGACATTTCACAGGTCTAGGACAGCTCTGGGCTTGACCTCTCTTCCTGACCTTGTGCGATATGATGCTGAGCATGCTTCTGTCAGTCAACAGTTCTTGTGGTGTTGCAGGTAAGTATGGTGtatgttgtgctgtgtgtgtgtgtttagtccatCACGTTCTCTTTCAGGGGAACGGTTCATCTCATCAGTGTGTTGTTCTTTTGTGTTCAGTAGGTGACGACGATTGCAGTGTGATCCTTCTGCGGTGCGGACGTGATATGAACGTTCTGTGTCAGCTGGCTGGATTAAAACTACTGGCTTCCAGAGGCCATGCTCCTGGATTCTAACTGACTCTCCGTCAATCAGTGGTGGCAGTGGTCTAGCTGACCTGTCGTAGTGtcgcttttgttgttgttgtctctgtgcaCGTTTTCCATGCATTTCCTATTAGCTGTTAGCTGTTCCTGTTGGTTGGTGCTGGGAAGGATTGAGCGAAGTCTGCGGCTCATCAACAGCTGGGCTGGTGATTTGAAGTTGTCAACTGGAGTGTTGCGGTATTCAAGAAGACTGAGATAAAAGCCTTCAAGTACTCATCTGACCAACTTCTTCAGGGCCAGCCAGGCCCCCTGTCGCCCCCCAGGCGCCCTGAAACCCAACCCCCATAAGAAGAAGCCCAAATACGACCTGCCCTTGCCCAGTATACATACAAGATCACAGCCATGTCAGGTGGGCGTCAGGCTTGTAAGAGACATTAATTATCTGTGAGATTCAGTGAACAAGGCTGAAAGGACTGGGTATTGGCTCCTACTGGTTACTCTGCCTTCTACTGTGATGGAGAATGCCTCTACCCTCTGTTCCTGCATGAACTCCACCACCCACACTATGATCCAACTAGTGGTTTGTTGAACATTAATAGAAATGAAACTCCAGCACACTGGTAGCACTAAAGACGGGTGAGTATAACTTTTCCAGGTGAGTTGAACCTGCCTGTGGGTGCGGTGGGGATATTCCTGGGAGGTCTACTGATGAAGAGGTACggtggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatctaaaactgtatttttttgtgaagaatcaacaacaagtg

Function

NR:

description
PREDICTED: uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041791.1 True 2800 mRNA 0.43 5 342502 353584

Neighbor

gene id symbol gene type direction distance location
LOC118947139 NA coding downstream 108592 229775 ~ 233910 (-)
LOC110514508 LOC106595224 coding downstream 225998 114200 ~ 116716 (-)
trnaa-cgc-21 NA coding downstream 229201 113230 ~ 113301 (-)
trnat-ugu-59 NA coding downstream 229664 112767 ~ 112838 (-)
trnaa-ugc-228 NA coding downstream 231238 111193 ~ 111264 (-)
LOC118947150 LOC106599077 coding upstream 8348 361932 ~ 363177 (-)
trnaa-cgc-22 NA coding upstream 52141 405725 ~ 405796 (-)
trnat-ugu-71 NA coding upstream 53616 406850 ~ 407547 (-)
trnaa-cgc-23 NA coding upstream 54228 407812 ~ 407883 (-)
trnat-ugu-72 NA coding upstream 55691 409275 ~ 409346 (-)
G2340479 NA non-coding downstream 37168 305001 ~ 305334 (-)
G2340457 NA non-coding downstream 155419 186764 ~ 187083 (-)
G2340455 NA non-coding downstream 156727 185350 ~ 185775 (-)
G2340432 NA non-coding downstream 268366 73281 ~ 74136 (-)
G2340415 NA non-coding downstream 283233 56226 ~ 59269 (-)
G2340518 NA non-coding upstream 1872 355456 ~ 355819 (-)
trnat-ugu-74 NA non-coding upstream 59864 413425 ~ 413657 (-)
G2340549 NA non-coding upstream 63505 417089 ~ 417302 (-)
G2340552 NA non-coding upstream 89627 443211 ~ 443479 (-)
G2340407 NA other downstream 279364 62414 ~ 63138 (-)
G2340905 NA other upstream 453306 806890 ~ 814655 (-)
G2340951 NA other upstream 525225 878809 ~ 929132 (-)
G2341053 NA other upstream 805014 1158598 ~ 1164054 (-)

Expression


Co-expression Network