trnaa-ugc-259



Basic Information


Item Value
gene id trnaa-ugc-259
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 915965 ~ 916036 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaa-ugc-259
ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcttctcca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-259 True 72 mRNA 0.54 1 915965 916036

Neighbor


gene id symbol gene type direction distance location
trnaa-ugc-258 NA coding downstream 1561 914333 ~ 914404 (-)
trnaa-ugc-257 NA coding downstream 3195 912699 ~ 912770 (-)
trnaa-ugc-256 NA coding downstream 4260 911634 ~ 911705 (-)
trnaa-ugc-255 NA coding downstream 6430 909464 ~ 909535 (-)
trnat-ugu-118 NA coding downstream 7173 908721 ~ 908792 (-)
trnaa-ugc-260 NA coding upstream 1566 917602 ~ 917673 (-)
trnaa-ugc-261 NA coding upstream 3742 919778 ~ 919849 (-)
trnat-ugu-119 NA coding upstream 5176 921212 ~ 921283 (-)
trnaa-ugc-262 NA coding upstream 5919 921955 ~ 922026 (-)
LOC110514453 LOC106596281 coding upstream 22835 938871 ~ 948116 (-)
G2340897 NA non-coding downstream 96339 811254 ~ 819626 (-)
G2340903 NA non-coding downstream 98151 810062 ~ 817814 (-)
G2340902 NA non-coding downstream 99562 808537 ~ 816403 (-)
G2340923 NA non-coding downstream 111586 799794 ~ 804379 (-)
G2340925 NA non-coding downstream 123331 788819 ~ 792634 (-)
G2340968 NA non-coding upstream 969 917005 ~ 921098 (-)
G2340974 NA non-coding upstream 17455 933491 ~ 935264 (-)
G2341006 NA non-coding upstream 89887 1005923 ~ 1040396 (-)
G2341021 NA non-coding upstream 142769 1058805 ~ 1115633 (-)
G2341025 NA non-coding upstream 143821 1059857 ~ 1064279 (-)
G2340905 NA other downstream 101310 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 799249 114200 ~ 116716 (-)
G2340407 NA other downstream 852827 62414 ~ 63138 (-)
G2341053 NA other upstream 242562 1158598 ~ 1164054 (-)

Expression



Co-expression Network