trnaa-ugc-260



Basic Information


Item Value
gene id trnaa-ugc-260
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 917602 ~ 917673 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaa-ugc-260
ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcttctcca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-260 True 72 mRNA 0.54 1 917602 917673

Neighbor


gene id symbol gene type direction distance location
trnaa-ugc-259 NA coding downstream 1566 915965 ~ 916036 (-)
trnaa-ugc-258 NA coding downstream 3198 914333 ~ 914404 (-)
trnaa-ugc-257 NA coding downstream 4832 912699 ~ 912770 (-)
trnaa-ugc-256 NA coding downstream 5897 911634 ~ 911705 (-)
trnaa-ugc-255 NA coding downstream 8067 909464 ~ 909535 (-)
trnaa-ugc-261 NA coding upstream 2105 919778 ~ 919849 (-)
trnat-ugu-119 NA coding upstream 3539 921212 ~ 921283 (-)
trnaa-ugc-262 NA coding upstream 4282 921955 ~ 922026 (-)
LOC110514453 LOC106596281 coding upstream 21198 938871 ~ 948116 (-)
trnat-ugu-120 NA coding upstream 87867 1005540 ~ 1005611 (-)
G2340897 NA non-coding downstream 97976 811254 ~ 819626 (-)
G2340903 NA non-coding downstream 99788 810062 ~ 817814 (-)
G2340902 NA non-coding downstream 101199 808537 ~ 816403 (-)
G2340923 NA non-coding downstream 113223 799794 ~ 804379 (-)
G2340925 NA non-coding downstream 124968 788819 ~ 792634 (-)
G2340974 NA non-coding upstream 15818 933491 ~ 935264 (-)
G2341006 NA non-coding upstream 88250 1005923 ~ 1040396 (-)
G2341021 NA non-coding upstream 141132 1058805 ~ 1115633 (-)
G2341025 NA non-coding upstream 142184 1059857 ~ 1064279 (-)
G2341020 NA non-coding upstream 150908 1068581 ~ 1074200 (-)
G2340905 NA other downstream 102947 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 800886 114200 ~ 116716 (-)
G2340407 NA other downstream 854464 62414 ~ 63138 (-)
G2341053 NA other upstream 240925 1158598 ~ 1164054 (-)

Expression



Co-expression Network