trnat-ugu-123



Basic Information


Item Value
gene id trnat-ugu-123
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 1011768 ~ 1011839 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnat-ugu-123
ggcatggtggccaagcggtaaggtgtcggtcttgtaaaccgaagatcatgggttcaaatcccatccgtgcct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnat-ugu-123 True 72 mRNA 0.54 1 1011768 1011839

Neighbor


gene id symbol gene type direction distance location
trnaa-ugc-265 NA coding downstream 1393 1010304 ~ 1010375 (-)
trnat-ugu-122 NA coding downstream 2005 1009692 ~ 1009763 (-)
trnaa-ugc-264 NA coding downstream 3469 1008228 ~ 1008299 (-)
trnat-ugu-121 NA coding downstream 4081 1007616 ~ 1007687 (-)
trnaa-ugc-263 NA coding downstream 5545 1006152 ~ 1006223 (-)
trnaa-ugc-266 NA coding upstream 541 1012380 ~ 1012451 (-)
trnat-ugu-124 NA coding upstream 2005 1013844 ~ 1013915 (-)
trnaa-ugc-267 NA coding upstream 2617 1014456 ~ 1014527 (-)
trnat-ugu-125 NA coding upstream 4081 1015920 ~ 1015991 (-)
trnaa-ugc-268 NA coding upstream 4693 1016532 ~ 1016603 (-)
G2340949 NA non-coding downstream 19765 876032 ~ 992003 (-)
G2340974 NA non-coding downstream 76504 933491 ~ 935264 (-)
G2340968 NA non-coding downstream 90670 917005 ~ 921098 (-)
G2340897 NA non-coding downstream 192142 811254 ~ 819626 (-)
G2340903 NA non-coding downstream 193954 810062 ~ 817814 (-)
G2341021 NA non-coding upstream 46966 1058805 ~ 1115633 (-)
G2341025 NA non-coding upstream 48018 1059857 ~ 1064279 (-)
G2341020 NA non-coding upstream 56742 1068581 ~ 1074200 (-)
G2341032 NA non-coding upstream 105922 1117761 ~ 1120758 (-)
G2341059 NA non-coding upstream 172428 1184267 ~ 1184799 (-)
G2340951 NA other downstream 82636 878809 ~ 929132 (-)
G2340905 NA other downstream 197113 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 895052 114200 ~ 116716 (-)
G2340407 NA other downstream 948630 62414 ~ 63138 (-)
G2341053 NA other upstream 146759 1158598 ~ 1164054 (-)

Expression



Co-expression Network