trnat-ugu-132



Basic Information


Item Value
gene id trnat-ugu-132
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 1030462 ~ 1030533 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnat-ugu-132
ggcatggtggccaagcggtaaggcGTTGGTCTTGTAAAccaaagatcatgggttcaaatcccatccgtgcct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnat-ugu-132 True 72 mRNA 0.53 1 1030462 1030533

Neighbor


gene id symbol gene type direction distance location
trnaa-ugc-274 NA coding downstream 1395 1028996 ~ 1029067 (-)
trnat-ugu-131 NA coding downstream 2007 1028384 ~ 1028455 (-)
trnaa-ugc-273 NA coding downstream 3473 1026918 ~ 1026989 (-)
trnat-ugu-130 NA coding downstream 4085 1026306 ~ 1026377 (-)
trnaa-ugc-272 NA coding downstream 5551 1024840 ~ 1024911 (-)
trnaa-cgc-68 NA coding upstream 7569 1038102 ~ 1038173 (-)
trnat-ugu-133 NA coding upstream 8397 1038930 ~ 1039001 (-)
trnaa-ugc-275 NA coding upstream 9137 1039670 ~ 1039741 (-)
LOC118947143 LOC106595224 coding upstream 10756 1041289 ~ 1043295 (-)
LOC118947154 NA coding upstream 22692 1053225 ~ 1053343 (-)
G2340949 NA non-coding downstream 38459 876032 ~ 992003 (-)
G2340974 NA non-coding downstream 95198 933491 ~ 935264 (-)
G2340968 NA non-coding downstream 109364 917005 ~ 921098 (-)
G2340897 NA non-coding downstream 210836 811254 ~ 819626 (-)
G2340903 NA non-coding downstream 212648 810062 ~ 817814 (-)
G2341021 NA non-coding upstream 28272 1058805 ~ 1115633 (-)
G2341025 NA non-coding upstream 29324 1059857 ~ 1064279 (-)
G2341020 NA non-coding upstream 38048 1068581 ~ 1074200 (-)
G2341032 NA non-coding upstream 87228 1117761 ~ 1120758 (-)
G2341059 NA non-coding upstream 153734 1184267 ~ 1184799 (-)
G2340951 NA other downstream 101330 878809 ~ 929132 (-)
G2340905 NA other downstream 215807 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 913746 114200 ~ 116716 (-)
G2340407 NA other downstream 967324 62414 ~ 63138 (-)
G2341053 NA other upstream 128065 1158598 ~ 1164054 (-)

Expression



Co-expression Network