trnaa-cgc-68



Basic Information


Item Value
gene id trnaa-cgc-68
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 1038102 ~ 1038173 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnaa-cgc-68
ggggatgtagctcagtggtagagcgcatgcttcgcatgtatgaggtcctgggttcaatccccagcttctcca

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnaa-cgc-68 True 72 mRNA 0.56 1 1038102 1038173

Neighbor


gene id symbol gene type direction distance location
trnat-ugu-132 NA coding downstream 7569 1030462 ~ 1030533 (-)
trnaa-ugc-274 NA coding downstream 9035 1028996 ~ 1029067 (-)
trnat-ugu-131 NA coding downstream 9647 1028384 ~ 1028455 (-)
trnaa-ugc-273 NA coding downstream 11113 1026918 ~ 1026989 (-)
trnat-ugu-130 NA coding downstream 11725 1026306 ~ 1026377 (-)
trnat-ugu-133 NA coding upstream 757 1038930 ~ 1039001 (-)
trnaa-ugc-275 NA coding upstream 1497 1039670 ~ 1039741 (-)
LOC118947143 LOC106595224 coding upstream 3116 1041289 ~ 1043295 (-)
LOC118947154 NA coding upstream 15052 1053225 ~ 1053343 (-)
trnaf-gaa-186 NA coding upstream 21900 1060073 ~ 1060145 (-)
G2340949 NA non-coding downstream 46099 876032 ~ 992003 (-)
G2340974 NA non-coding downstream 102838 933491 ~ 935264 (-)
G2340968 NA non-coding downstream 117004 917005 ~ 921098 (-)
G2340897 NA non-coding downstream 218476 811254 ~ 819626 (-)
G2340903 NA non-coding downstream 220288 810062 ~ 817814 (-)
G2341021 NA non-coding upstream 20632 1058805 ~ 1115633 (-)
G2341025 NA non-coding upstream 21684 1059857 ~ 1064279 (-)
G2341020 NA non-coding upstream 30408 1068581 ~ 1074200 (-)
G2341032 NA non-coding upstream 79588 1117761 ~ 1120758 (-)
G2341059 NA non-coding upstream 146094 1184267 ~ 1184799 (-)
G2340951 NA other downstream 108970 878809 ~ 929132 (-)
G2340905 NA other downstream 223447 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 921386 114200 ~ 116716 (-)
G2340407 NA other downstream 974964 62414 ~ 63138 (-)
G2341053 NA other upstream 120425 1158598 ~ 1164054 (-)

Expression



Co-expression Network