trnai-aau-178



Basic Information


Item Value
gene id trnai-aau-178
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 1061776 ~ 1061849 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnai-aau-178
ggccggttagctcagttggttagagtgtggtgctaataacgccaaggtcatgggttcgatccccgtactggcta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnai-aau-178 True 74 mRNA 0.54 1 1061776 1061849

Neighbor


gene id symbol gene type direction distance location
trnai-aau-177 NA coding downstream 1475 1060228 ~ 1060301 (-)
trnaf-gaa-186 NA coding downstream 1631 1060073 ~ 1060145 (-)
LOC118947154 NA coding downstream 8433 1053225 ~ 1053343 (-)
LOC118947143 LOC106595224 coding downstream 18481 1041289 ~ 1043295 (-)
trnaa-ugc-275 NA coding downstream 22035 1039670 ~ 1039741 (-)
trnaf-gaa-187 NA coding upstream 447 1062296 ~ 1062368 (-)
trnai-aau-179 NA coding upstream 602 1062451 ~ 1062524 (-)
trnaf-gaa-188 NA coding upstream 2111 1063960 ~ 1064032 (-)
trnai-aau-180 NA coding upstream 2266 1064115 ~ 1064188 (-)
trnaf-gaa-189 NA coding upstream 3775 1065624 ~ 1065696 (-)
G2341006 NA non-coding downstream 21380 1005923 ~ 1040396 (-)
G2340949 NA non-coding downstream 69773 876032 ~ 992003 (-)
G2340974 NA non-coding downstream 126512 933491 ~ 935264 (-)
G2340968 NA non-coding downstream 140678 917005 ~ 921098 (-)
G2340897 NA non-coding downstream 242150 811254 ~ 819626 (-)
G2341020 NA non-coding upstream 6732 1068581 ~ 1074200 (-)
G2341032 NA non-coding upstream 55912 1117761 ~ 1120758 (-)
G2341059 NA non-coding upstream 122418 1184267 ~ 1184799 (-)
G2341069 NA non-coding upstream 166964 1228813 ~ 1229240 (-)
G2340951 NA other downstream 132644 878809 ~ 929132 (-)
G2340905 NA other downstream 247121 806890 ~ 814655 (-)
LOC110514508 LOC106595224 other downstream 945060 114200 ~ 116716 (-)
G2340407 NA other downstream 998638 62414 ~ 63138 (-)
G2341053 NA other upstream 96749 1158598 ~ 1164054 (-)

Expression



Co-expression Network