G2340902


Basic Information

Item Value
gene id G2340902
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493666.1
NCBI id JAAXML020000359.1
chromosome length 1258143
location 808537 ~ 816403 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2680649
ttctgacattatcatgtaggagcgcccctttcattttccacatgtccaattctccctttTGTCTCCACTCAGTAACTGTTATCTACACATTCTGTTATCTTTGCTCGTCCTGGCTCCCTTTTAAAACTtatcctctctgctctccaaccttcaaggtctctgcagtgcaggggagggctcttctgtctgccttttccccttatctgtctgtagctcgttttctcatgtttccaaatttgaactaaatgtctcactgtttggctttatctaaactcatggattttttttttttgaaaaacatgtctatggtggcactttctaaagtccttatataggttaattaaaccccactataattaatttaccttaaaaataaaaaataaaaacaaaccgtATTACCCATGACCACAAATTAAATATTCAAAATGGCACCCCCTATACACAGGTGTTAAAACCAAACACAAATATCTCAATTTCTTCCCTGCCCTGTTGGCTCAAAATATGTCCCAAATACTTAACATGAGTCTACCATAAATAAAACTTATCCTAGCTAAATTTTCACACCacgttcatcagagaaaatatatTGACACTATAATGTAAATTTCACTGCCTTTTTGTATTAAATTACCTTAATATCAGTATTATAAATTACCCTAGATTCTCcatccaaatggctttccaatgaggctgatcagaccacaaAGGAAAGTTACAATGGAGGTCATAAGTCATACCACCCCTTCAAAGAAGTGTTTCTTACTATATTAAACAACATTCCTCTATCAAAAGATTTCACCTATTTAATTAagactcagaaaataaaaacgtataatatttcatatgtgagtgtacccctttaagatatcttGTCTCTGGGAACATGGAAATCCCCTTGAACCCAAAACGTTTGctacaaacaaaacctaataattataataataccttcaaataatttgttttaaatttcctcaatgtttcatgtaactcattcaGTCTTTAAAGGATTGTCTCCCCAAAATGCTTTATACCCTGCCAATAAACTCACACAATTGTGATAaacgtgcactgtccctttaacaTAAAATAATATCAGCCTGCAATCCACTCTGCGGGCCTTTCATTGTTCCCCATAATGAAAACAGATTCTAATGTTAGTATACCTTAACCTCCTGTTTAATTTCAGTGGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2680649 True 1192 lncRNA 0.35 2 808537 816403

Neighbor

gene id symbol gene type direction distance location
trnar-ucg-75 NA coding downstream 133107 675358 ~ 675430 (-)
trnar-ucg-74 NA coding downstream 135271 673194 ~ 673266 (-)
trnar-ucg-73 NA coding downstream 137059 671406 ~ 671478 (-)
trnar-ucg-72 NA coding downstream 138128 670337 ~ 670409 (-)
trnar-ucg-71 NA coding downstream 138478 669987 ~ 670059 (-)
LOC118947141 LOC106595224 coding upstream 4045 820448 ~ 824848 (-)
LOC118947142 LOC106596281 coding upstream 13059 829462 ~ 837281 (-)
LOC118947146 NA coding upstream 32805 849208 ~ 851265 (-)
LOC118947149 LOC106581842 coding upstream 38570 854973 ~ 857555 (-)
trnat-ugu-110 NA coding upstream 72574 888977 ~ 889048 (-)
G2340923 NA non-coding downstream 4158 799794 ~ 804379 (-)
G2340925 NA non-coding downstream 15903 788819 ~ 792634 (-)
G2340901 NA non-coding downstream 32449 767980 ~ 776088 (-)
G2340894 NA non-coding downstream 108267 693757 ~ 700270 (-)
G2340875 NA non-coding downstream 186462 619307 ~ 622075 (-)
G2340949 NA non-coding upstream 59629 876032 ~ 992003 (-)
G2340968 NA non-coding upstream 100602 917005 ~ 921098 (-)
G2340974 NA non-coding upstream 117088 933491 ~ 935264 (-)
G2341006 NA non-coding upstream 189520 1005923 ~ 1040396 (-)
G2341021 NA non-coding upstream 242402 1058805 ~ 1115633 (-)
LOC110514508 LOC106595224 other downstream 691821 114200 ~ 116716 (-)
G2340407 NA other downstream 745399 62414 ~ 63138 (-)
G2340951 NA other upstream 62406 878809 ~ 929132 (-)
G2341053 NA other upstream 342195 1158598 ~ 1164054 (-)

Expression


Co-expression Network