G2342139


Basic Information

Item Value
gene id G2342139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493668.1
NCBI id JAAXML020000291.1
chromosome length 1079841
location 439576 ~ 440541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2682381
gggtcaaggtttggctttttcaagagaggctttattactgccacttttagtgagtttggtacacatccggtggatagagagtcgtttattatgttcaacataggagggccaagcacaggaagtagctctttcagtagtttagttggaatagggtccagtatgcagcttgaaggtttagaggccatgattattttcatcattgtgtcaagagatatagtactaaaacacttgagcgtctctcttgatcctaggtcctggcagagttgtgcagactcaggacaactgagctttgaaggaatacgcagatttaaggaggagtccgaaatttgctttctaataatcataatcttttcctcaaagaagttcatgaatttatcactgctaaagtgacagacagtaacagtgggtccagccagccagacagtaacagtgggtccagccagccagacagtaacagtgggtccagccagacagtaacagtgggtccagccagacagtaacagtgggtccagctagccagacagtaacagtgggtccagccagccagacagtaacagtgtgTCCAGCCAGCCAGAAACAGTGGatccagccagacagtaacagtgggtccagccagtcagacagtaacagtgggtccagccagacagtaacagtgggtccagccagccagacagtaacagtgggtccagccagccagacagtaatagtgggtccagccagacagtaacagtgggtccagtcagccagtaacagtgggtccagtcagccagtaacagtgggtccagtcagacagtaacagtgggtccagccagacagtaacagtgggtccagccagccagacagtaacagtgggtccagccagacagtaacagtgggtccagtcagccagtaacagtgggtccagtcagccagtaacagtgggtccagccagccagacagtaacagtgggtccagccagacagtaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2682381 True 966 lncRNA 0.50 1 439576 440541
Loading

Neighbor

gene id symbol gene type direction distance location
fam117ba LOC106575892 coding upstream 102858 300525 ~ 336718 (+)
LOC110524928 bmpr2 coding upstream 158872 226700 ~ 280704 (+)
LOC110512950 LOC106575054 coding upstream 400872 31499 ~ 39258 (+)
LOC118947559 LOC106575045 coding downstream 65601 506142 ~ 537996 (+)
LOC118947561 LOC106593246 coding downstream 108974 549515 ~ 550735 (+)
LOC118947575 NA coding downstream 110215 550756 ~ 550934 (+)
LOC118947558 nol5 coding downstream 111319 551860 ~ 570372 (+)
LOC118947569 NA coding downstream 116387 556928 ~ 557005 (+)
G2342137 NA non-coding upstream 4957 434366 ~ 434619 (+)
G2342114 NA non-coding upstream 11989 427376 ~ 427587 (+)
G2342111 NA non-coding upstream 21415 417922 ~ 418161 (+)
G2342110 NA non-coding upstream 22530 416805 ~ 417046 (+)
G2342107 NA non-coding upstream 29517 409801 ~ 410059 (+)
G2342140 NA non-coding downstream 747 441288 ~ 442711 (+)
G2342146 NA non-coding downstream 18218 458759 ~ 460410 (+)
G2342148 LOC106575933 non-coding downstream 27004 467545 ~ 759618 (+)
LOC118947562 LOC106593246 non-coding downstream 134981 575519 ~ 645018 (+)
G2342190 NA non-coding downstream 146733 587274 ~ 594436 (+)
G2342106 NA other upstream 32959 404278 ~ 406617 (+)
G2342085 NA other upstream 131469 307014 ~ 308107 (+)
G2341964 NA other upstream 370395 63041 ~ 69181 (+)
G2342223 NA other downstream 341729 782270 ~ 784678 (+)
wdr12 LOC106575933 other downstream 373699 814203 ~ 846223 (+)
G2342247 NA other downstream 491094 931635 ~ 933855 (+)
G2342447 NA other downstream 520265 960806 ~ 963092 (+)

Expression

G2342139 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G2342139 Expression in each Bioproject

Bar chart with 21 bars.
G2342139 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network