G2343301



Basic Information


Item Value
gene id G2343301
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493670.1
NCBI id JAAXML020000887.1
chromosome length 928286
location 562290 ~ 644694 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2684097
gctttaaaacccatttctgcagcattagtaaagatatgatcaaaacatgttgatgatttcattcctctactgtttgtaatgaccctggtaggttgattgataacctgaaccaggatACAGACACTGGGTACAGTTGGAAGTTTATTCCTGAGTAGGCAGCTTGAtgagagccagtcaatatttaaatcacccagaaaaatatac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2684097 True 204 lncRNA 0.38 2 562290 644694

Neighbor


gene id symbol gene type direction distance location
LOC118947614 NA coding upstream 6006 552848 ~ 556284 (+)
LOC110519809 LOC106592670 coding upstream 18941 536336 ~ 543665 (+)
LOC118947626 LOC106595264 coding upstream 287526 265758 ~ 274764 (+)
LOC118947627 LOC106595305 coding upstream 303892 245205 ~ 258398 (+)
LOC110514247 LOC106595205 coding upstream 320983 225395 ~ 241307 (+)
LOC118947628 LOC106591075 coding downstream 205236 849930 ~ 858980 (+)
LOC110515697 LOC106591074 coding downstream 220460 865154 ~ 874888 (+)
G2343114 NA non-coding upstream 61976 480308 ~ 500314 (+)
G2343236 NA non-coding upstream 73864 417151 ~ 488426 (+)
G2343230 NA non-coding upstream 146538 400201 ~ 415752 (+)
G2343222 NA non-coding upstream 167988 379581 ~ 394302 (+)
G2343325 NA non-coding downstream 7212 651906 ~ 691766 (+)
G2343334 NA non-coding downstream 39029 683723 ~ 701458 (+)
G2343326 NA non-coding downstream 60834 705528 ~ 725544 (+)
G2343336 NA non-coding downstream 69265 713959 ~ 730600 (+)
G2343346 LOC106590981 non-coding downstream 106743 751437 ~ 833584 (+)

Expression


G2343301 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G2343301 Expression in each Bioproject

Bar chart with 12 bars.
G2343301 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 70.
End of interactive chart.

Co-expression Network