LOC118947670 (LOC106602113)


Basic Information

Item Value
gene id LOC118947670
gene name LOC106602113
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493672.1
NCBI id JAAXML020000394.1
chromosome length 888553
location 131390 ~ 136173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972587.1
TTCTACTGGTTGGATTTCTGTCCCAGGGTGATGATGCAGTCACCTGTACCTCAGTCACCGTGTGTTAGTGTCAGGACGGAGAAGTACGTTTCAATAACAGGAAGTCGGCACCAGAGCCCCAGGTCGATCCAGTGACTCTCCGTGTCAACGATGTCAACGTTGGACAGTCAGGATATCTGGAAAGCCGTAGGAGCAGCGGTGCTGGGCTTCATCTCTGGCGTACCTGGAGGTTACCTTCTGTCCTCCACAATGGCGGCAGAACTCGGTGGCCTGGGGCCTCCACCAGAAGACATTAACAAGGGAGAATCAGAGGCAGACAAAGGGCTCGTCACCTTCCTGACCCTCTTGATAGCAATGTTCCTGATGTTGTTTCTGCCCATGGCAGTAGGAGGAATACTGTGCCTCGCTGCCTCCATGGCAATCAGGAAGGCTGGGGAGACGGAGCCGGACGCTACGGAGGTGGCAGCGGTCGTAACAGTGGTTCTGATGGGGACCTCTGCTATCTGCGGAGGTGTGGGGTTCCTCTTGGAAACAGCCGTTGGAGAACTGACTGACGTCCTCACCGTGTACCAATACACGGTAGAAATGGCTGTGAAAGTCATCTTCATCGTCGTGTCTCCTTTCATGGCTGCGTTGGCTGCAGGGGTGTCGGTTCAGTTCGGTAAAGGAGCAGTCAAACTGAGGGCGGCAGCAGGCATAGGAACAGGGATTTTAGCAGCCTTGAAGTCCCAGTCTATCCTGGGGCATTGGGGCACGATGGGGGCTCTGTTTGGTCCGGCGGCGGCTGCGGGGGTGGCTCTGTCTGCGGCTCTAAGGCGCAGCAGTAGCAGCTACGGGAAGGCAGGGAGACTGGGGGCCACACTGGGGGCCATGTGCGCCACGTGGTTCGGGAGATGGACTCTGAGTTATTTCACGGTGTGGATTTTAATATGGATCTTTCTGATTTCGCTGCTGTCCTTAGTGGTTGTGGATCCCACCAGACCGGCTAATCAAGGGGAAAGAATCTCAGATACAATGTCAGCGGAGGAGATATAGTCTCTACATGTTTCTTTATACCCATTTGAGACAGTAGGTGTGctacctgtaaaaaaaaaaaaaaatctaaggcCATGTTTATATGAGCCCCTTTCATCGAAGCCCTTAGTGGCCACTCCCGAGTTGTTttactcccgagtggcgcagcggtctaagtcacTACATCTCAGttgctagagacgtcactacagaccctggttcgattccaggctgtatcacaaccgggccgtgattgg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106602113, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972587.1 True 1271 mRNA 0.54 2 131390 136173
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110534600 LOC105020859 coding upstream 33821 41929 ~ 99500 (+)
LOC118947671 LOC106592777 coding downstream 504959 641132 ~ 654704 (+)
LOC110514819 LOC103353170 coding downstream 520577 656750 ~ 674399 (+)
LOC118936626 LOC106591850 coding downstream 542264 678437 ~ 687027 (+)
G2344333 NA non-coding upstream 18437 112753 ~ 112953 (+)
G2344327 NA non-coding upstream 35241 95700 ~ 96149 (+)
G2344326 NA non-coding upstream 40842 90028 ~ 90548 (+)
G2344323 NA non-coding upstream 56155 74921 ~ 75235 (+)
G2344344 NA non-coding downstream 24025 160198 ~ 160415 (+)
G2344347 NA non-coding downstream 30516 166689 ~ 168640 (+)
G2344350 NA non-coding downstream 34511 170684 ~ 174734 (+)
G2344355 NA non-coding downstream 42567 178740 ~ 178984 (+)
G2344356 NA non-coding downstream 43075 179248 ~ 179459 (+)
G2344439 NA other downstream 314317 450490 ~ 450970 (+)
G2344761 NA other downstream 622440 758613 ~ 759500 (+)

Expression

LOC118947670(LOC106602113) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
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LOC118947670(LOC106602113) Expression in each Bioproject

Bar chart with 14 bars.
LOC118947670(LOC106602113) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8.
End of interactive chart.

Co-expression Network