LOC110517917 (LOC106595072)


Basic Information

Item Value
gene id LOC110517917
gene name LOC106595072
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493672.1
NCBI id JAAXML020000394.1
chromosome length 888553
location 694792 ~ 819312 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972588.1
GGCACACGCTTGATAAAACAGTTGATCTCCGTCTGTTTTGATAGATTTTGTGGTATTTTACGTAGGTTTAAAACATACAATTCATGTAGGTTTACGGTATTAATGTTATATTCATACATGTAGCTCTAAAACGgacaaaatgttgatttttttttccccccctggCGACCGCGGACTTCTTTAGGGGGACCTGTTGATTCTACGGTGTAGCCCACCGAAGCAGCAATGGAGGTATCCGATGTTGACCGGTGACAGGCACACATGAACACTCTCAACCATCTAGTGAAGACCTACATCCAAGCAAAGATGGACGCCATGGATACACAGCGGGCCTTGGAGGCTGTGGAGAGACTCCAGGCCAAGctgaaggacagaggagaggctcCTACAGAGGAGAAACTATCACTACTGAAGACCGTTCTACAGAGCCCTCTGTTCCTTCAGATACTAACCATGAAACAGACACATCTACAGCTGCCAgaggagAAGAAGTCAGTACCGAAGTCTGTTTCCCTCAACACGGGTCTCTCCACGGCCATGTCTCTGGGCCTGAGGACCATCTCCCATAGCGACTCCTATACCTGGGCCcagaacaacagcagcagcagtagtggaggtggtggaggaggaggaggaggaggtagccCCCCTGCTAAACACTCCCTACCTCGGCAGAACTACGGAGGCAGTCTCAGTGCTCTCAACACAAACACAGAAAGCAACGCCGTGACCAATAAGATACAGTGTATGACTCAGTTATGTACGCCTCCACGAATCTCCAGGACCTTATCGATGGGAAGAAACCTGTCGTATATCGCCAACGAGaagCGTCACATAGAGTTGATAGAGCTGGAGAACGATGGGAAGGGGCTGGGCTTCGGCATTGTAGGGGGTCGATCCTCTGGAGTCCTGGTCAAAACCATCCTACCAAGTGGCCCTGCTGGACTGGACAAGCGTCTGCGCAGCGGGGACCACATCCTGCGTATCGGGGACACAGACCTGGCAGGCATGGGCAACGAGGAAGTGGCTCACGTTCTCCGCAACGCAGGGTCAAGGGTCAAACTGCTCATTGCTAGGGACGTCGCGGTCTCCACTGGAACCAacgacctctccctctcctcgcccccactccctctcctcgCCCAGCAACAACAGAGGGTGGCCAGGATGGGCAAACAGCTGTGTGATGTGGAGGAGGACTCTGAGTACAGTGTCCAGTTCAGTAAGAACAACATGGGCCTGGGATTCACTGTCACCAGCTCCATAGGGGAGCAGAACTCTGGGGTGCAGGTGAAGAGCATCGTGAAGGGCAGCGCTGTGGACCAAGCCAGTCAGATATACATCGGAGACAAGATCTTAGCTgtggATGGTGTAAGCCTACAGGGCTGCAGTGAGCAGAGAGCCCTGGAGGTCCTCAGGAAGACAGGCCAGATAGTCAGACTGAGGCTGATGAGGAGGGCCTCTAGGATGGGTAAAACCACGAAgtatccccctcctcccctggAGCCCTACGTTGTCACCCGTACAGAGACAGGGAAACATGACAAGACAGACCAGACTGGTGTCATCAACAGAGGAAAACAAATGTCTCTGCGTGAGATGTCCAGAAGAGCCAGTATGATGTACTCTGAACAACGACTAGACGCCAGAACCGgagGGAAGCTGACTGCAGCAGAGGAAGAGGAGTTGAAGAGCAGGTGGCAGGCTGCTCTGGGACCCAGATATCAAGTGGTTgtGTGTCAGCTAGAGAGGTTCAGTGAGACCAGTGGTCTAGGCATCAGCATGGAGGCCAGGGCAGGACACCACTACCTGTGCTCCGTCTTACCTGAGGGGCCCGTCGGACAGAGCAGGAAGATACACCCTGGAGACCAGATACTGGAGGCGAATGGTATCCCTCTGATAGGAGAGACTCACAGAGAGGTGATCAGCGTTCTGAGAGAGctgcctctgtgtgtctgtatggtgtgctGCCGCGTCGTGCACCCACAGCTACGGGACAGTGAccacgatgatgatgatgatgaagatgtacAGCTCCCCCTCAAAGAGCTACTGGCTGAGTTCAATGGCAAgtccCAGTATGACCAGCCCTGCTGTCTACTTCCTGGTTGTAACAACAGGGATTGTGGGAGTCGTGGTTTTAATAAGCCTGTGTCTCCTCCTCTGGCCAtgtgggagagagacagtcaggtGATAGAGCtggtgaagggagaggaaggcCTGGGATTCAGCATCCTAGACTACCAGGACCCAGAGGACGACTCTAAGACTGTTCTGGTGATCCGCTCCCTGGTCCCCGGTGGCGTGGCCGACTCAGACGGACGCCTGCTGCCCGGTGACCGGCTCATGTCCGTCAACGACGTGGACCTGGTCCGGTCGACGCTGGAGCGAGCCGTGCACGTCCTCAAAACCACCGGCTACGGGGTCGTGCGCATCGGCGTCGCCAAGCCGCTGCCGATCGAGTGTTGTGTCCTGGAGTCCATCCCAGAGTCGTCGAGGTCGTCGAgagacgagacccagtcgttatCGAGAGATGAGAAGGATACTCTCCACTCAGCTGGGATGCTAGCCTCCTCCACACAGCAGGCGCATGCTAACAGCTACGGCTCACACCAGAGGAACAGCCAACCGTGCTCCACACTGAAGGACGAGAAATCTCCACGTCATTGTTCCAGCGGCAACATGGAGGACGGCGATAAGCTCCTGGCCCCGCCCCCTTCTTCTTTCGGCAGCCATTTTGAGAGGACAATCACTGTTGTCAGGGGCAACCGTAGCCTTGgcCTGACAGTGAGTGCTATGAAGGATGGCTCAGGGATGTTGATCCGGTCAGTGGTCCGTGGAGGGTCTGTCTGTCAGGACGGGAGGCTGGGCGTCGGGGACACTATCCTGGCTGTTAACGGAGAACCCACCACCAACCTGACCAACGCTATGTGCAGAGCCATGCTGCGGAGACACTCTGTTATAGGTTCAGATATGAGTGTGACATTCATCCCTTCGTTTCTGGTAGAGGAGCACCGTGCCTCTATGGCCCAGCAGCCTCTGTCATCCATCATGGTGGACGGCCCCTCACCCTGCCCCCTGACACCCTCCCCTACCCCTGCTGGAGGTCCGACCCCTTCCCCTACCCCTCCTGGAGGTCTGACCCCTTCCCCTACCCCTCCTGGAGGTCTGACCCCTTCCCCTACCCCTCCTGGAGGTCTGACCCCTTCCCCTACCCCTCCTGGAGGTCTGACCCCTTCCCCTACTCCCCCTGGAGGTCTAACCCCTTCCCCTACCCCTCCTGGAGCCCCAGATACAGCCTCAACAGTCCCAACTCCAGGTCCAGCTACAGCCCCAAGGCCTCAAGGCCCTTCTCTACCCAGACCTGTAGTATCAGCTACAAGTACAGCTCCAGCCTCAACGCCAACCAAAGGCCCACCCAGACCCCCACCCCCAGACAAGAGctctaGCCTCAACCCTTACCCCAGCTCTAGCGTCAACCCCGGCCTCGGTCTCTCAGCCACAGCTCCAATCCAAAGCCTAATCCCTAAACCCCCACCCTCACCCGTACCACTGAACGAGAGGAGAGgtgtggatggagtgagagaggaggagaagaaagtggagaggaagcgagaggaggaggaggaggaggtgagagaggaagaagagagagaggacgagatgTTGGTTTATCCTACTAACCTCAGTTGGGCTCAACCTAGAAGGGTCAAGTTGATGCGTTCTTCAGGCCAGTCTCTGGGCATCAGTAtcatgggagggagagggatgggcaGCAGGCTGAGCagtggagaggtgatgagaggagTGTTCATTAAACATATCACACCAGACAGCCCTGCTGGACACAACGGCACCCTGAAGACTGGAGACAGGATACtggagGTAGGAGGCGTGGATCTGAGAGATGCCAGCCATGAGCAGGCAGTGGAGGCCATCCGTAGTGCTGGAGACCCTGTTGTCTTCCTGGTACAGACTGGACAACACAAATCACAGTCCTCTCCTGTGCTCTCCAACCATGAGAGACAAGCCTCAGCATCACACAGGGACTCACCGAACAACAGGATGCCAGAGAGTCACAGTGGTCTGTTCCTTAGTCTCTCCCCCGCCAACCCCTTCACCCCTACTCCCTTTAAGCCGACAGCCAATAGGACGGTCAGGAGAAGCCCCACAACTGTCTCTGCACCAATCACACGGAGAGACACAGAAGACGACGGCTGGAagaAGATGATGTCCAGGTATGGAGGTCTGCCAGGTGAGCTCCATATGATAGAACTGGAGAAGAGTCCCCGTGGAGTCACTAGCACCGAGGCCCCGGGACAGGGTCTGGTTCCTGGTCTGGGTCTCAGCCTGACGGAGGACAGGGAAGGTTCCAGAGCCCACCTCGGCGTCTACGTGGCCGGGGTCGACCCCCAGGGGGCGGCGGGGCGAGACGGTCGGATACGGGTGGGAGATGAGCTACTGgagATCAACGGTCAGATCCTGTATGGTCGTAGTCACCAGAACGCTACAGCCATCCTCAACGGTGCTCCTTCTAAAGTCCAGATTCTCCTCAGCAGGAATAAAGCCGCTCTGGCGCAGATGACTCAAGGACCCATGGCTGGggactcctcctcttcctccctccatccctccatctctctctcctcttttctccacccctccatccacgTCTCTACCTCCCATCCCCCCATTCCTCCCCACTCCTCTGTCGGCACTGCCAGGaacgcctcctcctcctccagcggGCGATCTGATTGGCCAACGGGCTCcgctctgacccctgacctcctgTGCTGTCCCATAATACCCGGCGTTGACAGCACCATAGAGATCTGTAAAGGACACTTGGGCCTGGGACTCAGCATCGTGGGGGGGTGTGACACGCTActggGGGCGATAATAATCCACGAGGTTAATGATGGAGGAGCAGCTCAGAGAGACGGGAGGCTGTGGGCTGGAGACCAGCTACTAGAGGTGAATGGTATAGACCTGGGCCAGGCCACCCATGAGGAAGCTATAGGGGTGTTGAGGCTGACCCCTCAGCGGGTGCGTCTCACGGTGTTCAGACAACAGCAGGAGTACGGGGAGGATGACCTGTGGGATGTCTTCCAGCTGGAGCTCAGACTACAACCTGGACAGACCCTGGGGCTCAGCATTGTAGGGAAGAGCAACGACAccggtgtgtttgtgtctgagatCATTGGAGGGGGTGTGGCTGATGGAGACGGACGGCTGTTTCTAGGAGACCAGATCCTGTCAGTCAACAGAGAGGATGTCAGAACAGCTACACAGGAACACGTTACCTCACTGTTACAgAGCTGCAGTAGTGGAACAGTGATCCTAGAGATCGCTCGCTTCAAAGCCGCCTGCGTTCACTACTCCTGTGGAAGTCAGAGTGGTGACTCCGTAGGTAGTGACAGCTCCACCCTGACCCCGTCCACTGTGTATGAGGTCCAGAgccaccaccagggggagacagagagacgccAGAGAGGACAGGACCACTCAGTTGAAGACCACCATGAGATAAGGACAGTGGTCATGCATAAGGGTCCGTGTGACTCTCTGGGTCTGAGTGTAGCTGGTGGGGTTGGTTCTCCTCATGGAGACGTACCTCTCTTCATCTCTACTATGGACCCTGCTGGACTGGCTGCCAGGTCACACCACATCTATgTAGGAGACTTCATGGTGAGTATTAATGATGTCTCCACTGAGGGGATGAGCCACGTCCAAGCTGGAGATTTGCTGAAGTCCATCAGTGGGACCATCACCCtacagGTGCTGACTACAGGGTCGGTGGATGAGGACTGTGGAGGAGGACAGGGTCAGAGGGATGTAGGACTCCCCTCCACAGGATccctacacaacaacatgagTCCCCCGTTTTATAGAACCATCAgtctggacagaggagctctgggtCTAGGCTTCAGTATAGTAGGAGGGTTCAGCAGTCCCCACGGAGACCTGCCCATCTACGTCAAAACTGTCTTCGGAAAGggaGCAGCGATTGAGGACGGCCGGCTGCAGCGCGGGGATCAGATCATCGCTGTGAACGGTCACAGTCTGGAGGGGGTCACCCACGCCGGCGCCGTCGCCATACTGAAGAGGACCAAGGGAACTGTAGTCCTCACCGTACTCTCCTGAGTGTCAGTCCTCACACAACCAACCGTCTGTCGCCCTTTGATGATGTCATCAGCAGACTacatcagggttgtgttcatcAGGAAACAGACAAAACAGGGAGGGACTGTCTGAACTTTTTTTTTCAATAAGGAACATTCATTTATgtgttctgttgcaaaacgttttgctacggtgtgtgtgcgcgtgtaatgaacacgaccctgttTATCTCTAGAAGGAGGTGAAGATTCTCACAGAAGAATGTCTTCTATATGTCCTCCTAGATGTAACTGGTTCTCATTGTAACAAAACTATGAACCCTGTAATGcatgtctatgtgtctgtgtacATCAATATGGACCTCATCATACCAGACTACTGACTACTCACATCACTGTCTCCTTCTAAATGCACCTCATCATACCAGACTACTGACTACTCACATCACTGTGTCTCCTTCTAAATGCACCTCATCATACCATACTACTGACTACTCACATCACTGTCTCCTTCTAAATGCACCTCATCATACCATACTACTGACTACTCACATCACTGTGTCTCCTTCTAAATGCACCTCATCATACCAGACTACTGACTACTCACATCACTGTCTCCTTCTAAATGCACCTCATCATACCAGACTACTGACTACTCACATCACTGTCTCTTTCTAAATGCACCTCATCATACCAGACTACTGACTACTCACATCACTGTCTCCTTCAATATGGAACTCGTCATACCAGACTACTGACTACTCACATCACTGTGTCTCCTTCTAAATGCACCTCATCATACCAGACTACTGACTACTCACATCACTGTCTCTTTCTAAATGCACCTCATCATACCAGACTACTGACTACTCACATCACTGTCTCCTTCAATATGGAACTCGTCATACCAGACTACTGACTACTCACATCACTGTGTCTCTTTCTAAATGCACCTCATCATACCAGACTACTGACTACTCACATCACTGTGTCTCCTTCTAAATGCACCTCATCATACCAGACCACTGACGACTCACATCACTAACTAACACACTCTAATGACGCAAGAACAAATGTGGCAATAGATGCCAAGACTCTTCGCCAATCTTTCATATTGGCGTTTAGGTGTAGAATTTACATTCTAATTAAGAATTCAAAATGggagcctttctctctctctgtctctctgtccctctgtctctctctctc
>TU2686263
tgttaacaggcCTGACAGTGAGTGCTATGAAGGATGGCTCAGGGATGTTGATCCGGTCAGTGGTCCGTGGAGGGTCTGTCTGTCAGGACGGGAGGCTGGGCGTCGGGGACACTATCCTGGCTGTTAACGGAGAACCCACCACCAACCTGACCAACGCTATGTGCAGAGCCATGCTGCGGAGACACTCTGTTATAGGTTCAGATATGAGTGTGACATTCATCCCTTCGTTTCTGGTAGAGGAGCACCGTGCCTCTATGGCCCAGCAGCCTCTGTCATCCATCATGGTGGACGGCCCCTCACCCTGCCCCCTGACACCCTCCCCTACCCCTGCTGGAGGTCCGACCCCTTCCCCTACCCCTCCTGGAGGTCTGACCCCTTCCCCTACCCCTCCTGGAGGTCTGACCCCTTCCCCTACCCCTCCTGGAGGTCTGACCCCTTCCCCTACCCCTCCTGGAGGTCTGACCCCTTCCCCTACTCCCCCTGG

Function

NR:

description
multiple PDZ domain protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972588.1 False 7337 mRNA 0.54 40 694792 819312
TU2686263 True 484 TUCP 0.61 2 740503 747999
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110519864 LOC103353169 coding downstream 291631 123398 ~ 403161 (-)
LOC110534599 kiaa0368 coding downstream 653346 170 ~ 41446 (-)
G2344812 NA non-coding downstream 3555 575569 ~ 691237 (-)
G2344859 NA non-coding downstream 3754 688075 ~ 691038 (-)
G2344858 NA non-coding downstream 7957 685380 ~ 686835 (-)
G2344852 NA non-coding downstream 30412 664048 ~ 664380 (-)
G2344833 NA non-coding downstream 70274 623817 ~ 624518 (-)
G2344899 NA non-coding upstream 1611 820923 ~ 821652 (-)
G2344903 NA non-coding upstream 5464 824776 ~ 825134 (-)
G2344916 NA non-coding upstream 19585 838897 ~ 839104 (-)
G2344920 NA non-coding upstream 23696 843008 ~ 843241 (-)
G2344922 NA non-coding upstream 24822 844134 ~ 844339 (-)
G2344505 NA other downstream 528683 165388 ~ 166109 (-)
G2344464 LOC106593555 other downstream 625249 67053 ~ 69543 (-)
G2344862 NA non-coding downstream 42559 697475 ~ 697944 (-)
G2344873 NA non-coding upstream 3020 751019 ~ 751925 (-)
G2344875 NA non-coding upstream 6249 754248 ~ 754812 (-)
G2344884 NA non-coding upstream 40934 788933 ~ 789930 (-)

Expression

LOC110517917(LOC106595072) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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LOC110517917(LOC106595072) Expression in each Bioproject

Bar chart with 18 bars.
LOC110517917(LOC106595072) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
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Co-expression Network