XLOC_004247 (BX548160.2)



Basic Information


Item Value
gene id XLOC_004247
gene name BX548160.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 34466395 ~ 34466513 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00008105
taaaacgctcttttaaaactaaaacgcactagtgtaaacagggcctaagctAAGCAGGGCTTAGCCTGGTCACTACCTGAAtgcgagaccacatgggaaaaactaGGTTACTGTTGGAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100488

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00008105 True 119 rRNA 0.44 1 34466395 34466513

Neighbor


gene id symbol gene type direction distance location
XLOC_004244 NA coding downstream 107706 34315525 ~ 34358689 (-)
XLOC_004245 BX548160.1 coding downstream 110733 34355544 ~ 34355662 (-)
XLOC_004243 FO681390.1 coding downstream 211175 34249456 ~ 34255220 (-)
XLOC_004242 lsg1 coding downstream 233489 34219991 ~ 34232906 (-)
XLOC_004241 tmem44 coding downstream 247184 34201183 ~ 34219211 (-)
XLOC_004248 pik3ca coding upstream 22356 34488869 ~ 34522249 (-)
XLOC_004249 NA coding upstream 84334 34550847 ~ 34577106 (-)
XLOC_004250 mapkapk3 coding upstream 113572 34580085 ~ 34628789 (-)
XLOC_004251 dnah1 coding upstream 166879 34633392 ~ 34720630 (-)
XLOC_004252 chchd4a coding upstream 313097 34779610 ~ 34783938 (-)
XLOC_004063 CR854846.1 misc downstream 18338717 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 21774704 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 21844628 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 21875099 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 21953133 12512966 ~ 12513262 (-)
XLOC_004235 NA non-coding downstream 473248 33992033 ~ 33993147 (-)
XLOC_004234 CR925698.1 non-coding downstream 500123 33966158 ~ 33966272 (-)
XLOC_004254 BX293991.1 non-coding upstream 758509 35225022 ~ 35225139 (-)
XLOC_004255 NA non-coding upstream 971500 35438013 ~ 35441417 (-)
XLOC_004257 NA non-coding upstream 1112217 35578730 ~ 35741444 (-)
XLOC_004264 NA non-coding upstream 1775546 36242059 ~ 36246756 (-)

Expression



Co-expression Network