G2345870


Basic Information

Item Value
gene id G2345870
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493674.1
NCBI id JAAXML020000349.1
chromosome length 871358
location 457260 ~ 457797 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2687787
ttctgggactcacccacaaacaggaccaagcctggcctgctgaggagtgacggactccatcctagctggaagggtgctctcatcttatctaccaacatagacagggctctaactcctctagctccacaatgaaatagggtgcaggcagcaggctgttagccagcctgccagcttagtggagtctgccactagcacagtcagtgtagtcagctcagctatcccattgagacagtgtctgtgcctcgacctaggttgggcaaaactaaacatggcggtgttcgccttagcaatcttactaggataaagacctcctccagtcctgccattattgaaagagattgtgatacctcacatctcaaaatagggctacttaatgttagatccctcacttccaaggcagttatagtcaatgaactaatcactgatcataatcttgatgtgattggcctgactgaaacatggcttaagcctgatgaatttactgtgttaaatgaggcctcacctcctggctacactagtgaccatatcccccgtgcat

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2687787 True 538 lncRNA 0.48 1 457260 457797

Neighbor

gene id symbol gene type direction distance location
LOC118936629 LOC106593446 coding upstream 152893 291432 ~ 310387 (+)
LOC118947675 NA coding upstream 165838 289749 ~ 291422 (+)
LOC110516397 ntf3 coding upstream 180914 156655 ~ 276346 (+)
LOC110519241 LOC106593460 coding upstream 409569 10543 ~ 48354 (+)
LOC118936628 LOC106595881 coding downstream 6712 464509 ~ 500660 (+)
LOC110513588 dmtf1 coding downstream 97111 554908 ~ 580828 (+)
LOC110510957 LOC106593040 coding downstream 145746 603543 ~ 631185 (+)
LOC118947679 LOC106593782 coding downstream 195666 653463 ~ 672907 (+)
LOC118947682 NA coding downstream 213175 670460 ~ 672230 (+)
G2345868 NA non-coding upstream 11712 444484 ~ 445548 (+)
G2345833 NA non-coding upstream 20506 436516 ~ 436754 (+)
G2345832 NA non-coding upstream 20821 435694 ~ 436439 (+)
G2345829 NA non-coding upstream 34200 422846 ~ 423060 (+)
G2345825 NA non-coding upstream 45174 406690 ~ 412086 (+)
G2345873 NA non-coding downstream 2785 460582 ~ 460915 (+)
G2345883 NA non-coding downstream 30518 488315 ~ 489408 (+)
G2345920 NA non-coding downstream 44941 502738 ~ 503780 (+)
G2345933 NA non-coding downstream 72882 530679 ~ 530925 (+)
G2345642 NA other upstream 357954 98797 ~ 99306 (+)
G2345921 NA other downstream 46117 503914 ~ 504340 (+)
LOC118947678 LOC106591916 other downstream 257455 692798 ~ 830422 (+)

Expression


Co-expression Network