G2345893



Basic Information


Item Value
gene id G2345893
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493674.1
NCBI id JAAXML020000349.1
chromosome length 871358
location 458295 ~ 458571 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2687826
ctttccaagctatttggaagacttccagtttggtgtggcgccatttccgttccaattttctggaagcttgcttcagagcttgggtattttctgtataccagggagctagtttcttatgacaaatgtttttaggggtgcaactgcatctagggtattgcgcaaggttaaattgagttcctcagttaggtggttaactgatttttgtcctctgacgtccttgggtaggcagagggagtctgtaAGGGCATCGAGGAATctgtgttgtctgagaatttat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2687826 True 277 lncRNA 0.44 1 458295 458571
Loading

Neighbor


gene id symbol gene type direction distance location
LOC118947677 LOC105015365 coding downstream 21879 317215 ~ 436416 (-)
LOC118947674 cwf19l1 coding upstream 44154 502721 ~ 548123 (-)
LOC118947676 tmem243 coding upstream 125829 584400 ~ 600063 (-)
LOC118947680 meig1 coding upstream 142776 601060 ~ 603458 (-)
LOC110510905 LOC100380711 coding upstream 171725 630296 ~ 654400 (-)
LOC118947681 NA coding upstream 187420 645991 ~ 646643 (-)
G2345890 NA non-coding downstream 12746 444564 ~ 445549 (-)
G2345865 NA non-coding downstream 34798 423155 ~ 423497 (-)
G2345861 NA non-coding downstream 46660 409995 ~ 411635 (-)
G2345857 NA non-coding downstream 60407 392288 ~ 397888 (-)
G2345858 NA non-coding downstream 61854 393611 ~ 396441 (-)
G2345919 NA non-coding upstream 42490 501061 ~ 501266 (-)
G2346006 NA non-coding upstream 54469 513040 ~ 513635 (-)
G2346010 NA non-coding upstream 60037 518608 ~ 518948 (-)
G2346016 NA non-coding upstream 92406 550977 ~ 551209 (-)
G2345887 NA other downstream 13838 437100 ~ 444457 (-)
G2346165 LOC106591916 other upstream 333580 792151 ~ 792776 (-)
G2346172 NA other upstream 353455 812026 ~ 812450 (-)

Expression


G2345893 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
End of interactive chart.

G2345893 Expression in each Bioproject

Bar chart with 20 bars.
G2345893 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2000.
End of interactive chart.

Co-expression Network