LOC118947710


Basic Information

Item Value
gene id LOC118947710
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493676.1
NCBI id JAAXML020000344.1
chromosome length 856417
location 287892 ~ 288374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972709.1
ATGAGATTTAGCCAGTTAGTTAGCTTGAAAAGACATGAGAGGGTGTACACAGGAGAAAAGCCACGccattgctcccagtgtggaaagagttttaagcGGATAGACACCCTCAAAGctcatgagcgaatacacacagggaAGAAGCCTTACCGCTGCTCCAAGTGTGGAAAGCGTTTTGGCCTGAAAGCTCATGTGCGaatacatacaggggagaagccttaccactgctcccagtgtgcaaAGCGGTTTACCCATTTAAGAAGCCTGAAAGAACACATGAGactgcacacaggggagaagccttaccaatgCGCCCAGTGTGCAAAGCGGTTTACCCATTTAAGAAGCCTGAAAGAACACATGAGactgcacacaggggagaagccttacaaaTGCTCAGACTGTGGGAAGACATGTTACACATCACAGTCACTTAAACATCATGTgcgaatccacacaggagagaataaTTACTTCTCCTAG

Function

NR:

description
zinc finger protein 239-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972709.1 True 483 mRNA 0.47 1 287892 288374

Neighbor

gene id symbol gene type direction distance location
LOC118947715 LOC106608452 coding downstream 6909 253502 ~ 280983 (-)
LOC110519498 NA coding downstream 39046 200338 ~ 248846 (-)
LOC118947714 LOC106564023 coding downstream 40417 105059 ~ 282192 (-)
LOC110515529 NA coding downstream 96184 148758 ~ 191708 (-)
LOC110513813 NA coding downstream 175475 107086 ~ 112417 (-)
LOC118947712 LOC106594764 coding upstream 42321 330695 ~ 339136 (-)
LOC110515504 LOC106594978 coding upstream 59444 347816 ~ 371219 (-)
LOC110511057 NA coding upstream 96421 384795 ~ 392322 (-)
LOC110511058 NA coding upstream 119300 407674 ~ 409750 (-)
LOC118947716 NA coding upstream 131367 419741 ~ 426271 (-)
G2347054 NA non-coding downstream 14994 272026 ~ 272898 (-)
G2347013 NA non-coding downstream 37695 181860 ~ 250197 (-)
G2347016 NA non-coding downstream 79716 195110 ~ 208176 (-)
G2346989 NA non-coding downstream 126101 117075 ~ 161791 (-)
G2346953 LOC106603761 non-coding upstream 10497 298871 ~ 299446 (-)
G2347121 NA non-coding upstream 159311 447685 ~ 448020 (-)
LOC110517267 LOC106594732 other upstream 282850 462273 ~ 844971 (-)
G2347341 NA other upstream 467815 756189 ~ 765433 (-)

Expression

LOC118947710 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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LOC118947710 Expression in each Bioproject

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LOC118947710 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 14.
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Co-expression Network