LOC110511058


Basic Information

Item Value
gene id LOC110511058
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493676.1
NCBI id JAAXML020000344.1
chromosome length 856417
location 407674 ~ 409750 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972724.1
TTATCTTTGGCAGAAGAGAGACCCgactcagaggaaccagagaCGTCTGAACCAGTGAGACGACaccactgttcccagtgtggaaagagttttaaccattTAGGAAATCTTAAAAACCACAAGAGAACACACGCAGAGAAGTCTTACAACTGCTCTCACTGTGCAAAGAGTTTTACTCATTTATGTAACCTAAAATTGCATGAGAGACGACACACAGGAGATAAGCCTTACCAATGCTCTCAGTGTGGTAAGAGATTTGTTGAGTCAACAGAACTGAAAGTTcataagagaatacacacaggggaaaagccGTACAACTGCTCTCACTGTGCAAAGAGTTTTACTCATTTATGTAACCTAAAATCGCATGAGAGACGACACACAGGAGATAAGCCTTACCAATGCTCTCAGTGTGGTAAGAGATTTGTTGAGTTAACAGAACTGAAAGTTcataagagaatacacacaggggaaaagccgtaccactgttcccagtgtggaaagagtttttcaACATTAAATGTCTTGAAaatgcatgagagaatacacacaggggaaaaaccattccaatgctcccagtgtgtaAAGACATTTTCCCGACCAGGGGACCTGAAAatgcacgagagaatacacacaggggaaaagccgtaccactgttcccagtgtggaaagagttttacatgGTTAAAGGTCTTGAAAATGCATGAGAGACGACACACAGGGGAAAAACCATTCCAATGCTCTCAGTGTGGTAAGAGATTTATTGCGTCAACAGAACTGAAAGTTcataagagaatacacacagggggaAAACCATTCCAATGCTCTCAGTGTGTAAAGACATTTTCCCGACCAGGGGACCTGAAATTACACGAGAGAATGCACACAGGGGAAAAGCCGtaccactgttcccagtgtggaaagagttttacaagGTTAAACGTCTTGAAAATGCATGAGAcaatacacacaggggaaaaaccATTCCAATGCTCTCAGTGTGTAAAGACATTTTCCCGACCAGGGGACCTGAAAttacacgagagaatacacacaggggaaaagccgtaccactgttcccagtgtggaaagagttttactcagttagGGAGTCTGAAAAGTCATAAGCGAATACattctggagagaagccttatcactgctccAAATGTGGAATTGCCTTTTCAGAGTTAAAAACCTTGAAaatgcatgagagaatacacacaggtgagaagccgtaccactgttcccactgtggaaagagttttagacAATCGCAACAGCTGAaacaacacgagagaatacacacaggagaaaagccttaccactgttcccagtgtggaatgAGTTTTAGGCAGTTAACGGGCCTCAAAGGTCATATGCAAATGCACTCTGGAGAGAAGTCAAACACATGTTCtcattgtggaaagagttttctGAGGTTAAGCACTCTGAAATCGCATgagcatatacacacatacaacaAGGAAAAGCTCTACCAATGTTCCGTGTGTGGAAAGTGGTTTACCCAGTTAGAAGCCCTGATTATGcatgacaggacacacacaggaggggATAAGacctaccactgctcccagtgtggaaagagatttaACTGGTTAAGGCACCTGAATAAGCATGAAAGAatacatacacaggaggagaagacataccactgctctcattgtggaaagacattttccaagtcagaggacctgaaatcacatgagagaatagagaggctGTGTTCTGACTTGTGTTTCTGACTGATcatttgtgtttttgtttcatGCCACGTGAAATCAAATTGTATGAAACCAGAAAAAAGGTTaacttttgttgtttttttcatttAGAGACATGATCATGTCTAATATCAGATTAAATATTTAAAACGGTCTGTTTGGTTTTGATGAGCTTTGATTGATTTGATAAGTATAAACCCTCTGTTGTTCATCATATGATTTTCTATTTGTTAAGAGatttttttttcatcaataatgactaattgtgtatacatttcaatcaggactgactaatcagaatactattatgttactgtatatatgtatgcatttt

Function

NR:

description
zinc finger protein 420-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972724.1 True 2077 mRNA 0.41 1 407674 409750

Neighbor

gene id symbol gene type direction distance location
LOC110511057 NA coding downstream 15352 384795 ~ 392322 (-)
LOC110515504 LOC106594978 coding downstream 36455 347816 ~ 371219 (-)
LOC118947712 LOC106594764 coding downstream 68538 330695 ~ 339136 (-)
LOC118947710 NA coding downstream 119300 287892 ~ 288374 (-)
LOC118947715 LOC106608452 coding downstream 126691 253502 ~ 280983 (-)
LOC118947716 NA coding upstream 9991 419741 ~ 426271 (-)
LOC118947711 NA coding upstream 19909 429659 ~ 432143 (-)
LOC118947717 LOC106594941 coding upstream 43369 453119 ~ 457555 (-)
LOC118947704 NA coding upstream 51436 459740 ~ 461968 (-)
LOC110517267 LOC106594732 coding upstream 52523 462273 ~ 844971 (-)
G2346953 LOC106603761 non-coding downstream 108228 298871 ~ 299446 (-)
G2347053 NA non-coding downstream 115459 271517 ~ 292215 (-)
G2347121 NA non-coding upstream 37935 447685 ~ 448020 (-)
G2347257 NA non-coding upstream 73406 483156 ~ 483372 (-)
G2347266 NA non-coding upstream 112971 522721 ~ 523424 (-)
G2347279 NA non-coding upstream 137971 547721 ~ 548213 (-)
LOC118947714 LOC106564023 other downstream 125482 105059 ~ 282192 (-)
G2347341 NA other upstream 346439 756189 ~ 765433 (-)

Expression

LOC110511058 Expression in all Baseline Samples

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LOC110511058 Expression in each Bioproject

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LOC110511058 Expression in each Sample
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Co-expression Network