G2347016


Basic Information

Item Value
gene id G2347016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493676.1
NCBI id JAAXML020000344.1
chromosome length 856417
location 195110 ~ 208176 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2689343
tcactacactcacaataacatctgctaaccctgtgtatgtgaccaataacatctgataaccatgtgtatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgcatgtgaccaataacatctgctaaccatgtgtatgtgaccaataacatctgctaaccatgtgtatgtgaacaaaaacatttgctaaccatctgcatgtcaccaataacatctgctaaccatgtgtatgtgaccaataacatttgatttgatttgaacaaaacaaATCCATGTGATGTTTGATCAATGTGGAAAACGGATTGGATTTGTAAAAATCCATCTACAAAAGGTATTTGTATTAATTTTCACACAACTGGTAACCACTGGCTGGTGACATTTAGTGTTTCACCCAACTggcaacctaaatccaatgacggtggacattttgtgttgatttcatgttgaattcactttagttgacgaatcaaagaaatgtaaatagaaactagatgttgaactgacatctgtgcccagtgggctggtTTGAATAAGCGGCAGgtgttggatcaatatccacatTAGTAGCTAAATTTCCATGCaattgtaacggatgtgaaacggctagcttagttagcggtgcgcgctaaatagtgtttcaattggtgacgttacttgctctgagaccttgaaatcgtagttccccttgctctgcaagggccgcggcttttgtggagcgatgggtaacgatgcttcgagggtgactgttgatgtgtgcagaaggtccctggttcgcgcccgggtatgggcgaggggacggtctaaaattatactgttacacaatttgcgacagattttcatgtgaatattctcaaATCTGCATAAAACAACATACGCATTTTCCCACCGGAAATGTTTGCATCAAACAGGTTTATTGCGGATAAAAGtctgcgtgatgacgtagtgcacggAAAAAATGTTTTCCTGTTGAATTCCCATGTACTGAATGAAAAATGCAAGTTacatgggtttccatcgcattttcaactctactgaggGTTTTGAAAAACCGTTGAGTTATATAACAAAAGTCCTCTTGTCCCGTGCACTGTAGCCAACAGCTCAAAGATACAGTGTTGGTAGGCTACcgacatgatgagattattatggataagagcgacaTTATTTTATTTGTGAAATGGCAACCAAGCATCAATCATCATCATGTCAACAGAAGAAGAccatcaaaatgtattggaaaggagcatcaagctcaacacatgcactttcaccaccctgtgaagttcatcatttatttcatctgtagcctaataaactgcatggtttcccaaatcgtagtgggaggaccacacaatatatcatcgcgtgactccaagttaactaagaTATGATCGTTATtaaatcaatatttgcgcataaaggattAATGCCGCCATTTCTCGTTTATacatttttactgacacaaaaagaccccaccatgtcaaaCAAAGTAACAAATCGTCTGTCGGCATTTAGAAAAGTGTAcaggcatatcctgtttccatcagcccggtcattactttggaaatggttggatcaatatccaccttcatgatatggatgaagcctgatttggaatgtctgagtagttctatatgatgtcataatacactcctctgataatcaagtgatatttggaatgtctgagtagttctatctgatgtcataatacacccctccGATAATCAAGTGATGTTCACATGTGAtgcatttgctccattgtttACATTTAAGTTGGAGGCCCACTCTGATGATGTATGTCTTACATCGTGGTGCTTTAAAAGAATAGTATGGTGACATCTTAGTGGGGCTTGAAATAAATAGGATTATTAATCAAAAACTCCTATAGCAACAATACACTGTGGCTTTGACTTCAAGAGAatgggtggtggtgctactctataggtaaAACTGTCCAGtatgaatgttcaatacacacaataggttgatcAGTAGCCAGTTAGCCAGCTGTACAGTCTAATAggaatgttcaatacacacaataggttgatcagtaggtgtaacggatgtgaaactgctagcttagttagcggtgcgcgctaaatagcgtttcaatcggtgacgtcacttgctctgagaccttgaagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2689343 True 2172 lncRNA 0.40 2 195110 208176
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110515529 NA coding downstream 3402 148758 ~ 191708 (-)
LOC110513813 NA coding downstream 82693 107086 ~ 112417 (-)
LOC118947713 LOC106564014 coding downstream 95035 92685 ~ 100075 (-)
LOC118947706 LOC106591226 coding downstream 154725 33153 ~ 40385 (-)
LOC118947707 LOC106591226 coding downstream 180910 7018 ~ 14200 (-)
LOC118947714 LOC106564023 coding upstream 34376 105059 ~ 282192 (-)
LOC118947715 LOC106608452 coding upstream 45326 253502 ~ 280983 (-)
LOC118947710 NA coding upstream 79716 287892 ~ 288374 (-)
LOC118947712 LOC106594764 coding upstream 122519 330695 ~ 339136 (-)
LOC110515504 LOC106594978 coding upstream 139642 347816 ~ 371219 (-)
G2346989 NA non-coding downstream 33319 117075 ~ 161791 (-)
G2347000 NA non-coding downstream 36177 158179 ~ 158933 (-)
G2346968 NA non-coding downstream 145786 47243 ~ 49324 (-)
G2347053 NA non-coding upstream 63341 271517 ~ 292215 (-)
G2347054 NA non-coding upstream 63850 272026 ~ 272898 (-)
G2346953 LOC106603761 non-coding upstream 90695 298871 ~ 299446 (-)
LOC110517267 LOC106594732 other upstream 363048 462273 ~ 844971 (-)
G2347341 NA other upstream 548013 756189 ~ 765433 (-)

Expression

G2347016 Expression in all Baseline Samples

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G2347016 Expression in each Bioproject

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G2347016 Expression in each Sample
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Co-expression Network