LOC118947904 (LOC106606697)


Basic Information

Item Value
gene id LOC118947904
gene name LOC106606697
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493685.1
NCBI id JAAXML020000486.1
chromosome length 631356
location 389054 ~ 400830 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972967.1
GGTATGAGAGAAGCACATTCTCTGACGAAACATCTTTACGACATTCAAAGTAAACACAAACTGCTTTACAGCAGCACTAAACATGGTGTCCCAATTTAGCGGTGTTTTGCAGTTGACAGATCTAGATGATTTTATCACTCCTTCCCAGGAATGTGTGAAACCAGTCAAGGTGGAGAAGAAGCAAGGCCGATCTGTGGCTAAAATTCAAATAGAAGATGATGGGAGCTATTTCCAGGTTAAACAGGATGGTGGAAAGCAGAAGCTGGAGAAAGCTAAGATCACTCTGAATGACTGCCTGGCCTGCAGTGGCTGCATCACCTCAGCTGAGAGTGTCCTTATCACACAGCAGAGTCATGAAGAGATTTACAGGGTGCTACGCAGCAacaagCAGGCAGGTGTAGCAGAGcagaaggtggtggtggtgtctgtgtCCCCACAGTCCAGAGCCTCCCTGGCAGCACGCTACGGCCTGAGCAGCAGTGAGGCAGGCAGGAGGCTCACCGCCTTCTTCAAGGGTCTGGGGGTTCACCACGTGTTTGACACCAGCTTCAGCAGGACCTTCAGCCTGTTGGAGAGTCAGAAAGAGTTTGTGGAGCGGTTCCATCGGAAGGAGCAAGACAAGCAGGCCCTGCCCATGCTAGCCTCTGCCTGCCCAGgttGGATCTGCTATGCAGAGAAAACCCATGGAGAGTTCATCCTGCCCTACGTCAGCTCCACCCGCTCCCCACAGCAGATGATGGGCTCTCTGGTGAAGGGCTTCTTCGCTGGCCAGCAGggcCTGAACCCACAGCAGATCTACCATGTGACTGTGATGCCCTGCTATGATAAGAAACTGGAGGCCTCCAGGCCTGACTTCTACCTGGAGGAGGCTGACACCAGAGAGGTGGACTGTGTCATCACTTCAGGAGAAGTtctgaagatgctagaggaagaGAAAGTGTTGCTCAGCGATGTGGAGCCAGCCCCATTAGATACAATgttcagcagtgtgtgtggtgatgAGTTGCTGGGCCATGCAGGGAGCGGTTCAGGAGGATACCTCCATCACGTGTTCACACACGCTGCCAGACAGCTGTTtggagaggaggtgaaggagcTCACCTACAAGACACTCAAGAACAAGGACTTCCAGGAGGTGACCCTGGAAAGGGACGGTGTGGTCGTGCTGCGTTTCGCCACAACCTACGGTTTCCGCAACATCCAGAACCTGGTGCAGAAACTCAAGAGGGGAAAGTCACCCTACCACTTCGTAGAGGTCATGGCCTGTCCGTCAGgTTGTCTGAATGGGGGAGGCCAGGTGAAGCCCTTACCAGAGCAGAACAACAAGGAGTTGCTGCAGCAGGTGGAGGATCTGTACAAGGAGGAGCGCCCTCTAGTGCCAGAGGAGGACCAGCACGTGGCAGAGCTTTACCAGTCCTGGCTACAGagtgtaggagaggagagagccaggGAGCTGCTGCACACACAGTACCATGCAGTGGACAAGGCCACCAACGGACTCCTTGTCAAATGGTGAAGGAGAGGGTGAAAGGATGTTGAAGGGTTTCTGTaagtgaatggtctgtcctcaaGTGtcagggtgcatctcaatagtctaaagtaGCCCTCTCTGTTTCATCTCCATTGAGTTTAACACAGGTTAGGTGGAAGCAACATGGCCGGTTCTTGTTGGGTATTTTCACCTGTCTTAGTTCTTTAATATcagtagaaataaagaaaggCATGATGCACATACATTTTGTCTATTGAGATGCATCCCTATTCTAGGATTATTTGAACCATTTGAGTGAAGTCACACAACTTGACCTTGGATTAATGTTTATGCTCCATCTGTACTGGATGACTGAATTTAGCACTTTCCTTCAccgtctctttgtctctctcctctaccgtctctttgtctctctcctctaccgtctctttgtctctctcctctaccgtctctctcctctaccgtctctttgtctctctcctctaccgtctctttgtctctctcctctaccgtctttgtctctctcctctctctgcttttaAGTTCCCCCCATTTCTTTTCTCTgtctatccatccctctatccttctgtCTGTGctttaaaggactgtctgtcagATCAAATAGAGCATTATCGCCAAGTGCTTAATTACTGTGGTGGCCtgtcatttatttatttgaaaataaaagagagccagccgcacactctaggagctcagatgcaaaaattttatgaagacagcttggttgtCGAAATGTTGGTAATtcaatttttgcatctgagctcctagagtgtgcggctctcttttcaagttttctactccgctagccagcacctagcCAGCACCTTGCCTAAATAGGTGTGTTTATTTTTCTTCTAGATCTGTCATTTATTTATACCAACATAAAGCCTGTATACATTCAGGCTATAGATTGTATACGCACAAGCTAATTCATACCAGACCACTACTACATTTAAGTGTGCACTAATTATGAATACAGCAGCAAATTCTGTTATTTCTCTTGTATGCACTGAAAAGGATTTGGACTCTTGAAATGTTTTCTGATGGAATTCTAAAGAAATATTTTAGTTTAAATGTATATCATTTCTGCCTTATTTATAATGAATCTATGATACATATTTTGCATATTAAAATGTTAGTCTAACTTTCAAGTACGTTATTCACCATGTACCAGCAGTCATTGATATACATACTGACACGATACTAAGGAACAGTTTTAGCTGTAGAAATAAGCATACACTTTCAATATTTACATTCATGTTTTCAGTGTTTTCTTCCTTTGTATGGCATGGTGAGAACGAGGTACATACCTTCATACGGTATGCTGTCAGTTAAGCAGCTAGGTTCAACCATTTAATATGGACTAAGTAATATTAGCAATGTCAAAATATATTGGTTATATATTAAACTAAATGTTTAGCAGCTCTTGTTATAGATGTGGTGAAATGTTAATACAGAATGTCAAGCAAACATCACCGTTTTACCCTAAGAATTCTGCAAGCGGGTAATAGTCATTAGGGATATGAATCTCTCACAAATATGAAATGAATTGTTAGGCCAACAATAGAAACAATCTGCTTTATTGCTTTTTCTGTGAAGGAGACAATGGAGCTTTTAGTAAAACCTATGTATCACCAACTTCACATTGGCACTCAAAGACTGATGTGTGTATGCATATATAATGGAGCTTTTGATTATCAATGAGCTTAAGTTGTCTTATTTTCTATAGTATGAGAGATGTTTGGAAGCGCTTCAGTCTTGATTTTCTAAATGTCCAGCAATCACACTAAAGTAGCCCTGGCTTCTCTAAAGGGACTATACCCCAAACCTCGGAAATATTGTTGAGTGAATATACCATATTAAAATAATAAAACACTTGATAAGAAACCT
>XM_036972968.1
GGTATGAGAGAAGCACATTCTCTGACGAAACATCTTTACGACATTCAAAGTAAACACAAACTGCTTTACAGCAGCACTAAACATGGTGTCCCAATTTAGCGGTGTTTTGCAGTTGACAGATCTAGATGATTTTATCACTCCTTCCCAGGAATGTGTGAAACCAGTCAAGGTGGAGAAGAAGCAAGGCCGATCTGTGGCTAAAATTCAAATAGAAGATGATGGGAGCTATTTCCAGGTTAAACAGGATGGTGGAAAGCAGAAGCTGGAGAAAGCTAAGATCACTCTGAATGACTGCCTGGCCTGCAGTGGCTGCATCACCTCAGCTGAGAGTGTCCTTATCACACAGCAGAGTCATGAAGAGATTTACAGGGTGCTACGCAGCAacaagGCAGGTGTAGCAGAGcagaaggtggtggtggtgtctgtgtCCCCACAGTCCAGAGCCTCCCTGGCAGCACGCTACGGCCTGAGCAGCAGTGAGGCAGGCAGGAGGCTCACCGCCTTCTTCAAGGGTCTGGGGGTTCACCACGTGTTTGACACCAGCTTCAGCAGGACCTTCAGCCTGTTGGAGAGTCAGAAAGAGTTTGTGGAGCGGTTCCATCGGAAGGAGCAAGACAAGCAGGCCCTGCCCATGCTAGCCTCTGCCTGCCCAGgttGGATCTGCTATGCAGAGAAAACCCATGGAGAGTTCATCCTGCCCTACGTCAGCTCCACCCGCTCCCCACAGCAGATGATGGGCTCTCTGGTGAAGGGCTTCTTCGCTGGCCAGCAGggcCTGAACCCACAGCAGATCTACCATGTGACTGTGATGCCCTGCTATGATAAGAAACTGGAGGCCTCCAGGCCTGACTTCTACCTGGAGGAGGCTGACACCAGAGAGGTGGACTGTGTCATCACTTCAGGAGAAGTtctgaagatgctagaggaagaGAAAGTGTTGCTCAGCGATGTGGAGCCAGCCCCATTAGATACAATgttcagcagtgtgtgtggtgatgAGTTGCTGGGCCATGCAGGGAGCGGTTCAGGAGGATACCTCCATCACGTGTTCACACACGCTGCCAGACAGCTGTTtggagaggaggtgaaggagcTCACCTACAAGACACTCAAGAACAAGGACTTCCAGGAGGTGACCCTGGAAAGGGACGGTGTGGTCGTGCTGCGTTTCGCCACAACCTACGGTTTCCGCAACATCCAGAACCTGGTGCAGAAACTCAAGAGGGGAAAGTCACCCTACCACTTCGTAGAGGTCATGGCCTGTCCGTCAGgTTGTCTGAATGGGGGAGGCCAGGTGAAGCCCTTACCAGAGCAGAACAACAAGGAGTTGCTGCAGCAGGTGGAGGATCTGTACAAGGAGGAGCGCCCTCTAGTGCCAGAGGAGGACCAGCACGTGGCAGAGCTTTACCAGTCCTGGCTACAGagtgtaggagaggagagagccaggGAGCTGCTGCACACACAGTACCATGCAGTGGACAAGGCCACCAACGGACTCCTTGTCAAATGGTGAAGGAGAGGGTGAAAGGATGTTGAAGGGTTTCTGTaagtgaatggtctgtcctcaaGTGtcagggtgcatctcaatagtctaaagtaGCCCTCTCTGTTTCATCTCCATTGAGTTTAACACAGGTTAGGTGGAAGCAACATGGCCGGTTCTTGTTGGGTATTTTCACCTGTCTTAGTTCTTTAATATcagtagaaataaagaaaggCATGATGCACATACATTTTGTCTATTGAGATGCATCCCTATTCTAGGATTATTTGAACCATTTGAGTGAAGTCACACAACTTGACCTTGGATTAATGTTTATGCTCCATCTGTACTGGATGACTGAATTTAGCACTTTCCTTCAccgtctctttgtctctctcctctaccgtctctttgtctctctcctctaccgtctctttgtctctctcctctaccgtctctctcctctaccgtctctttgtctctctcctctaccgtctctttgtctctctcctctaccgtctttgtctctctcctctctctgcttttaAGTTCCCCCCATTTCTTTTCTCTgtctatccatccctctatccttctgtCTGTGctttaaaggactgtctgtcagATCAAATAGAGCATTATCGCCAAGTGCTTAATTACTGTGGTGGCCtgtcatttatttatttgaaaataaaagagagccagccgcacactctaggagctcagatgcaaaaattttatgaagacagcttggttgtCGAAATGTTGGTAATtcaatttttgcatctgagctcctagagtgtgcggctctcttttcaagttttctactccgctagccagcacctagcCAGCACCTTGCCTAAATAGGTGTGTTTATTTTTCTTCTAGATCTGTCATTTATTTATACCAACATAAAGCCTGTATACATTCAGGCTATAGATTGTATACGCACAAGCTAATTCATACCAGACCACTACTACATTTAAGTGTGCACTAATTATGAATACAGCAGCAAATTCTGTTATTTCTCTTGTATGCACTGAAAAGGATTTGGACTCTTGAAATGTTTTCTGATGGAATTCTAAAGAAATATTTTAGTTTAAATGTATATCATTTCTGCCTTATTTATAATGAATCTATGATACATATTTTGCATATTAAAATGTTAGTCTAACTTTCAAGTACGTTATTCACCATGTACCAGCAGTCATTGATATACATACTGACACGATACTAAGGAACAGTTTTAGCTGTAGAAATAAGCATACACTTTCAATATTTACATTCATGTTTTCAGTGTTTTCTTCCTTTGTATGGCATGGTGAGAACGAGGTACATACCTTCATACGGTATGCTGTCAGTTAAGCAGCTAGGTTCAACCATTTAATATGGACTAAGTAATATTAGCAATGTCAAAATATATTGGTTATATATTAAACTAAATGTTTAGCAGCTCTTGTTATAGATGTGGTGAAATGTTAATACAGAATGTCAAGCAAACATCACCGTTTTACCCTAAGAATTCTGCAAGCGGGTAATAGTCATTAGGGATATGAATCTCTCACAAATATGAAATGAATTGTTAGGCCAACAATAGAAACAATCTGCTTTATTGCTTTTTCTGTGAAGGAGACAATGGAGCTTTTAGTAAAACCTATGTATCACCAACTTCACATTGGCACTCAAAGACTGATGTGTGTATGCATATATAATGGAGCTTTTGATTATCAATGAGCTTAAGTTGTCTTATTTTCTATAGTATGAGAGATGTTTGGAAGCGCTTCAGTCTTGATTTTCTAAATGTCCAGCAATCACACTAAAGTAGCCCTGGCTTCTCTAAAGGGACTATACCCCAAACCTCGGAAATATTGTTGAGTGAATATACCATATTAAAATAATAAAACACTTGATAAGAAACCT

Function

NR:

description
cytosolic Fe-S cluster assembly factor NARFL isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972967.1 False 3403 mRNA 0.45 11 389054 400830
XM_036972968.1 True 3400 mRNA 0.45 11 389054 400830

Neighbor

gene id symbol gene type direction distance location
LOC110486843 LOC106601652 coding downstream 5412 382082 ~ 383642 (-)
LOC110486835 LOC106606695 coding upstream 74 400904 ~ 418520 (-)
LOC118947907 LOC106606653 coding upstream 112776 513606 ~ 522862 (-)
LOC110486820 LOC106606690 coding upstream 122492 523322 ~ 568570 (-)
LOC110486817 LOC106601768 coding upstream 192626 593456 ~ 604197 (-)
LOC110519423 LOC106606673 coding upstream 203623 604453 ~ 607145 (-)
G2350577 NA non-coding downstream 59816 328314 ~ 329238 (-)
G2350575 NA non-coding downstream 62491 325859 ~ 326563 (-)
G2350574 NA non-coding downstream 63782 324691 ~ 325272 (-)
G2350572 NA non-coding downstream 73529 315311 ~ 315525 (-)
G2350555 NA non-coding downstream 124815 263146 ~ 264239 (-)
G2350618 NA non-coding upstream 23035 423865 ~ 424470 (-)
G2350622 LOC106606694 non-coding upstream 33952 434782 ~ 435028 (-)
G2350623 LOC106601785 non-coding upstream 34559 435389 ~ 435669 (-)
G2350625 NA non-coding upstream 36175 437005 ~ 437311 (-)
G2350656 NA non-coding upstream 93185 494015 ~ 506260 (-)
G2350578 NA other downstream 57717 330712 ~ 331337 (-)
G2350576 NA other downstream 58417 327477 ~ 330637 (-)
G2350264 LOC106606649 other downstream 288039 100617 ~ 101015 (-)
G2350619 e4f1 other upstream 27421 428251 ~ 429561 (-)
G2350673 LOC106606689 other upstream 109082 509912 ~ 510609 (-)
G2350665 NA other upstream 133409 534239 ~ 535381 (-)

Expression


Co-expression Network