LOC110519423 (LOC106606673)


Basic Information

Item Value
gene id LOC110519423
gene name LOC106606673
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493685.1
NCBI id JAAXML020000486.1
chromosome length 631356
location 604453 ~ 607145 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036972982.1
CAGATACGGTCCCACCGACTGCGGTGCTTGGCAACCCATATAAAACGTGATGACGTCTTCCTCTCTGAGCGTATTATGGGATGTGTGGAATTAAACAGCGAGGGCAGTATATAGAAAAATAAATAGCTTATAAACGAGGTTGAAGTAAACATGGAGCTATCGGCTGTTGGAGAGCGTGTCTTCGCTGCCGAGTCCATCATCAAACAACGCATAAGAAGAGGTCGAATGGAATACCTTGTGAAATGGAAGAGCTGGTCTAAAAAATATAGCACCTGGGAACCAGAGGAAAACATTCTAGATGCGCGCCTCTTCGCTGCGTTCGAAGAAAGGGAGCGTGAAAGGGAGTTATTTGGGCCTAAGAAGAGGGGACCGAAGCCGGAGACATTTCTGCTGAAGGCAAAGGCGAAAGCCACAGCAAAGACTTATGAATGCAGAAgagaaatgccaagggggattCGTGTTTCATACCCTGTTCCGATGCCTATGATTACACCGAGAGCTCGAGAAGGACTACGGGCTGTCGTGCCCACAATCTTTCCCCCTAGCACGGTCAACCGAGGAGAGAGCGTGAGGGTCAGACTGCCAGAGACTGAGAGAAGGCCGCGACCGGCGCCTCCGCACCCATTCATGGCTGAGGAATTTGTCAACATCCCTAGAAAAAGGGGACCTAAACCCAAGTTGCGTTTACGATTCAACATGGAGCCAGACAGCTGTCCAACAGAGGAGCCCGCGAAGAGGAGTCGGTTAGAGGAGCAGCAGGACCCATACGGTCTGTCTAAAATGTCCAGACATTGTCATCATGAAGGCGAAACATCTAAGAGAAGTGTCATCCAGTTGACACGCAGGTTTCAAGAGGGAACGAGCATTGTGCCAAAATCAAACAAAACTCAAAGACTGCTGGGGACTGTGTCCCATCCTGGCACCCATAGCCATGACGGTAGACTCCTCCATAAGGCTAGACTCGATCAACAGAGCCGCAGGactttagaatgccctgggggcatGTCTGTCCCACACCCCAAACTGAAACATGTGTCCACCAAAAACCATTTCTACAGAGCCAGTGACTCTTCTTCATCCATGCAACAGTCTAGGCCCATTGTTGTCGCCAAATCACCTGCATCGAGGAGTTCTGGAGAGCAGTCAGCAGTGTCTTGGAGGCCTTGTCTGGATAATGTTGAGAATGTGGTGGTAACCGATGTGACAACAAACTTTTTGACAGTCACCATCAAAGAGAGCAGCACAGACAAAGGTTTTTTCAAAGATAATAGATGAAATGAAGTCAGTATCTGCTTCACATAACATGACTAACAATGCAACAGCTATTTGTAAGAAGTTAGTAATAGCTTAATCATGATCATTTGAGATACATTTTCTATAGGCCTAACTATATCCAGAGTTGTATGTTTAATATGTATTATGTCAAAGTATTTAATGTAATAATGACAAAATTAAACATGTCTATCTA

Function

NR:

description
chromobox protein homolog 8-like

GO: NA

KEGG:

id description
K11455 CBX8, PC3; chromobox protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036972982.1 True 1468 mRNA 0.46 5 604453 607145

Neighbor

gene id symbol gene type direction distance location
LOC110486817 LOC106601768 coding downstream 256 593456 ~ 604197 (-)
LOC110486820 LOC106606690 coding downstream 35883 523322 ~ 568570 (-)
LOC118947907 LOC106606653 coding downstream 81591 513606 ~ 522862 (-)
LOC110486835 LOC106606695 coding downstream 185933 400904 ~ 418520 (-)
LOC118947904 LOC106606697 coding downstream 203623 389054 ~ 400830 (-)
LOC118947905 LOC106606687 coding upstream 7050 614195 ~ 623434 (-)
G2350705 NA non-coding downstream 14582 589274 ~ 589871 (-)
G2350691 NA non-coding downstream 34168 569677 ~ 570285 (-)
G2350686 NA non-coding downstream 46480 555658 ~ 557973 (-)
G2350679 NA non-coding downstream 63688 540161 ~ 540765 (-)
G2350708 NA non-coding upstream 4158 611303 ~ 611694 (-)
G2350665 NA other downstream 69072 534239 ~ 535381 (-)
G2350673 LOC106606689 other downstream 93844 509912 ~ 510609 (-)
G2350619 e4f1 other downstream 174892 428251 ~ 429561 (-)
G2350578 NA other downstream 273116 330712 ~ 331337 (-)
G2350576 NA other downstream 273816 327477 ~ 330637 (-)

Expression


Co-expression Network