G2350618


Basic Information

Item Value
gene id G2350618
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493685.1
NCBI id JAAXML020000486.1
chromosome length 631356
location 423865 ~ 424470 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2694490
TCCTGCTGTAGGTGAGAGTATACACCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACATCATGTTTATCAACCTCCTGCTGTAGGTGAGAGAATACATCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACACCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACACCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACACCATGTTTATCATTCCCCATTGACTAACTCACCACCATCTCCTCAGCCTCCATCTCCACACACTCCTCCATCACCTGGATCTCTGTCATCCTGCCCTCCATGTCCCTGACCTGCAGGACCTCTTTAGGCATCCCGTCCAGTGCCTGCTCCTcggcctcctccacctcctcagtgACTGCCTCCAGGGCGATGCCAGAGTTGATGATGGCCTGGCAGATGAGGTTGTCCCCCTCGGCCACCAGGGCATCTGCCTGAGCCTGGTCCAATATA
>TU2694491
TCCTGCTGTAGGTGAGAGTATACACCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACATCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACACCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACACCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACACCATGTTTATCAACCTCCTGCTGTAGGTGAGAGTATACACCATGTTTATCATTCCCCATTGACTAACTCACCACCATCTCCTCAGCCTCCATCTCCACACACTCCTCCATCACCTGGATCTCTGTCATCCTGCCCTCCATGTCCCTGACCTGCAGGACCTCTTTAGGCATCCCGTCCAGTGCCTGCTCCTcggcctcctccacctcctcagtgACTGCCTCCAGGGCGATGCCAGAGTTGATGATGGCCTGGCAGATGAGGTTGTCCCCCTCGGCCACCAGGGCATCTGCCTGAGCCTGGTCCAATATA

Function

NR:

description
transcription factor E4F1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2694490 False 489 lncRNA 0.51 2 423865 424470
TU2694491 True 489 lncRNA 0.52 2 423865 424470

Neighbor

gene id symbol gene type direction distance location
LOC110486835 LOC106606695 coding downstream 5345 400904 ~ 418520 (-)
LOC118947904 LOC106606697 coding downstream 23035 389054 ~ 400830 (-)
LOC110486843 LOC106601652 coding downstream 40223 382082 ~ 383642 (-)
LOC118947907 LOC106606653 coding upstream 89136 513606 ~ 522862 (-)
LOC110486820 LOC106606690 coding upstream 98852 523322 ~ 568570 (-)
LOC110486817 LOC106601768 coding upstream 168986 593456 ~ 604197 (-)
LOC110519423 LOC106606673 coding upstream 179983 604453 ~ 607145 (-)
LOC118947905 LOC106606687 coding upstream 189725 614195 ~ 623434 (-)
G2350577 NA non-coding downstream 94627 328314 ~ 329238 (-)
G2350575 NA non-coding downstream 97302 325859 ~ 326563 (-)
G2350574 NA non-coding downstream 98593 324691 ~ 325272 (-)
G2350572 NA non-coding downstream 108340 315311 ~ 315525 (-)
G2350555 NA non-coding downstream 159626 263146 ~ 264239 (-)
G2350622 LOC106606694 non-coding upstream 10312 434782 ~ 435028 (-)
G2350623 LOC106601785 non-coding upstream 10919 435389 ~ 435669 (-)
G2350625 NA non-coding upstream 12535 437005 ~ 437311 (-)
G2350656 NA non-coding upstream 69545 494015 ~ 506260 (-)
G2350578 NA other downstream 92528 330712 ~ 331337 (-)
G2350576 NA other downstream 93228 327477 ~ 330637 (-)
G2350264 LOC106606649 other downstream 322850 100617 ~ 101015 (-)
G2350619 e4f1 other upstream 3781 428251 ~ 429561 (-)
G2350673 LOC106606689 other upstream 85442 509912 ~ 510609 (-)
G2350665 NA other upstream 109769 534239 ~ 535381 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000034_04921458_04934523 E4F1 coding CI01000034 null 4921169 ~ 4934523 (-)