LOC110511645 (LOC106591454)


Basic Information

Item Value
gene id LOC110511645
gene name LOC106591454
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493688.1
NCBI id JAAXML020000806.1
chromosome length 586704
location 8552 ~ 17764 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036973071.1
TTTCCCTCCAGGCCTTGTCCAGAGGGGTCATAGTTCAGCATGGACACATCAATGTTACTGTGCAGCAGGACAGTCCTGTAGCCGAGGGTGACGTCACCTTGACGTTGGCAGTGGTCCCAGAGATGGCGCCGGTGGTTCAGCTCCTGGTGTACAGTATGCTACCCAGTGAGACTGTCATCGCCCACAGCATGAACTTCCCCACTGAGAAATGCTTCAggaacaagGTGTTGGTGGAGTTCTCACCCTCCAACGCTGTCCCAGGGGAGGAGAACACCCTGCATCTCTGCCGGCCCGGTTCCCTCTGTGGCCTCGGTGCTGTTGACCAGAGTGTTGGCATCATGGAGCCAGGGAAGAGGCTGGATgctgacaagATATTTAATTTGCTACCGGTCAAGGAGACGACCTATGTTCCCTACGAGCTTGAAGATCCAGTAGCATGTTTACGCGTTAGACCAAGGAGATCCATAATACCACACCCATATGGACCGTCTGAGCAGACAAATGATCCTTATGCAGTTTTTCAGACACTGGGATTGAAGCTAGCGACTAACCTGGATATAAGAGTACGTTCCTGCCTCAGTTACCAGGGGAACCAGTACTATCGCTCCTATGTAGCTTACAGCCTAATGGCTAGGCCTGGATCAGCAGGTCCTAGACTTGAAATGGCTGTGGCTGGTGGACTTGCCGCTCCACCTCCGCCACCCATACAGACGGTCCGTACATTCTTCCCTGAGACATGGATTTGGGACCTTGTGGAAGTTGGGGAGTCTGGATCTTTAGATGTCCCCCTGACAGTCCCAGACACCATCACCACCTGGGAGACTGAGGTCTTCTGCCTGGCCCCCAGTGGCTTTGGTCTGGCTCCTCTGGTGGAGCTCACGGTCTTCCAGCCCTTCTTCCTGGAGCTCACCCTGCCCTACTCAGTCATCCGGGGAGAGCACTTTGagctgaaggccactgtgtttaaCTACCTCTCCAAGTGCATCATGGTTTCTGTGACTCCAGCTCTTTCCTCAGACTACACTCTCACACCCTTGCGTGATGTCCAGGACTCCTCGTGCTTGTGTGCCAATGGACGAAAGACCTTCAGTTGGACACTGGCCCCCTCTGTCCTGGGGGTTTTGAACGTGTCTGTTAGTGCGGCGGCTGTCCGGTCCCAGACTGCGTGTGACAACGGGGTTGTGAACGTACCGGAGAGAGGACGCGTTGACACAGTCACACGGAGCCTGCTGGTGAAGgctgAGGGAACAGAGAAGAGCCACACCTACAACTGGTTGCTGTGTCCTACTGGAGAAGCTCTGACGGAGGAGGTGGAACTGCAACTTCCCCAGAATGTGGTGGATGGCTCTGCTAGGATTTCCCTCTCGGTTTTAGGGGACATCCTGGGTCGGGCCCTCAACAACCTGGATGGACTGTTGCAGATGCCGTATGGGTGTGGGGAGCAGAATATGGCCCTGCTCTCCCCCAATATCTACATCCTGGAGTACCTGAGGAACACAGAGCAGCTCACGCCAGCCATCCTAGAAAGCACCAAGTTCCTCACTAGTGGTTACCAACGGCAGCTGAACTACAAGAATGCTGATGGTGCGTACAGCACGTTTGGACAAGGCTTGGGGAACACCTGGCTGACTGCTTTTGTCTTGAGATCCTTTGGCAAAGCCCAGTCTTTCATCTATGTTGACCCGGCAACGATGGAGCAATCCAAGACTTGGTTGGAACGTCAACAAGGCCAACGTGGCTGTTTCAGAACTTTAGGGAAGCTCTTGAACAACAGAATTAAGGGTGGAGTGACGGATGAAGTCACACTGACGGCTTACATCACTGCTTCAATGCTGGAGCTCAACATGTCCGTGACGGATCATGTTGTGGACCACAGCTTGTCTTGCCTGAAGAACTCCACCAGTGATTTGTCCAACACCTACGCTACTGCTCTGCTGGCCTACACCTTCACCCTGGCAGGTGACATGGAGACACGGGCCCGGCTTCTGCAGCACCTCGACACCATCTCATTTCAAGAGGGGGGTCTCCTGCACTGGTCCCAGTCCTCCTCTGAGACCTCGCCCTCCCTGGAGGTGGAGATCAGCTCCTACGTTCTGCTGGCGTCCCTCAGTGCCTCTTCTCGGTCGACCTCTGACCTGGGCTACGCCTCCCGCATCGTCAGGTGGCTGGTGAGGCAGCAGAACGCCTACGGAGGCTTCTCTTCCACCCAGGACACGGTGGTGGCCCTCCAGGCCCTGGCTCTCTACTCCACCAGGGTGTTCAGTAGAGGAGGAGCCAGCACAGTGACGGTCAGGTCTCCCAGTGGGGACCGGTGCCTCTTCCATGTGAACCAAAACAACAAGCTTCTGTACCAGGAGAGGGCGCTGCAGGACACAGAAGGGAAGTACAGCGTTGAAGTGCAGGGCAGTGCTTGTGCCTCAGTGCAGGTGGTGCTCCGCTACAACGTCCCTAGTCCTACCAGAAGAACAACGCTCAGTATCCAGGTGACTCCAGAGGTGGACTGCAACAGGAAGTCTTTGAGACCCAGAGTCACGCTGAAGCTCCAGTCTCGATATCATGGAAAGGAGCTCACCACCAATATGATTATAGTGGATTTGAAAATGCTCTCTGGGTTTTCTCCAGATCCAGACTCTTTGGGGAGGCTGCGGGGTTCAAGTCAAGTGGATCGTGTTGATATCAAAGATGACCATGTGTTAATGTACTTGACAGAGCTGACATCACTACTTCCTTTCCACATCACCCTGGACATCATACAGGAGTTCCCAGTACAGAATCTAAAGCCAGCAGTGGTCAAGATCTATGACTACTACCAGCCAAGTGACAAGGCTGAGACAGAATACGTCTTCCCTTGCAACTAGGGGTTCCAAGCTGATGGAAGAAGATGACGTTGAtgtcacacctgcaacccttgAGACGTCTTTCAAGTGCTGAAGTAAAACTATGGATCTGGAAATAAAGTGTTTCATTAAAACCCT

Function

NR:

description
alpha-2-macroglobulin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036973071.1 True 2975 mRNA 0.54 26 8552 17764

Neighbor

gene id symbol gene type direction distance location
LOC118948151 LOC106564321 coding upstream 2641 1443 ~ 5911 (+)
LOC110510468 LOC106580921 coding downstream 6914 24678 ~ 40031 (+)
LOC110510382 tsc2 coding downstream 34431 52195 ~ 118182 (+)
LOC118948152 NA coding downstream 234875 252639 ~ 254326 (+)
LOC110511098 LOC105031543 coding downstream 273647 291411 ~ 298247 (+)
LOC110516582 LOC106592167 coding downstream 457089 474853 ~ 586313 (+)
G2351490 NA non-coding downstream 84154 101918 ~ 105468 (+)
G2351491 NA non-coding downstream 100826 118590 ~ 118932 (+)
G2351482 NA non-coding downstream 102636 120400 ~ 121247 (+)
G2351483 NA non-coding downstream 103580 121344 ~ 122085 (+)
G2351492 NA non-coding downstream 104917 122681 ~ 123674 (+)

Expression

LOC110511645(LOC106591454) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
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LOC110511645(LOC106591454) Expression in each Bioproject

Bar chart with 19 bars.
LOC110511645(LOC106591454) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2.
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Co-expression Network