LOC110513695


Basic Information

Item Value
gene id LOC110513695
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493694.1
NCBI id JAAXML020000446.1
chromosome length 566240
location 78343 ~ 83632 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036973246.1
ttttgaagccCAAAACCGGAAGTGACGTTGACTCTACGTCCTGTTTTCTAAACGCAAAGAATACACTGCTAGTTTATAAGCTTAATTTAGCTATTCACTACGAAGTTTAAAATGTCTAGAATAGAACTATTACGGTCGTTTTTCAACCAGAGATTAGCAGCTGCTGCCGAAGAGATATTCCGGGTCGTGGAGAAAACGATAGCCGAGTACCAGGACGAGATGTCCCGCTCGGAAGAGAGGAACAGCCGTCTACAGAAGCTGCTCGATATCACTATTAAACCAGAAATAAAGTTGTATAGAGCAGACACCCAGCTGCAGCAGCTCCCAGCCTGTGGAGAACAGGTTCCCTCTGAGCAGGAGGAGTGGATCCACAGTCTGGGGCAGGAGGATCCACAGTCTGGGCCAGGAGGATCCACAGTCTGGAGCAGGAGGATCCACAGTCTGGGGCAGGAGGATCCACAGCCCGTTCACATTAAAGAGGAACAGCAGGAACTCTGGACCAGTCTGGGGGAAGGTCAGGAGTCTGACACCACAGAGTTCATATTCACTTCCGCTTGTGTGCAAAGTGACTGTAATCAGGACCCACCTCAGCCCTCACATCTCTACCAGACCCAGAGTACCAGCACCTCATATGAACAGTTGAAAAGAGGAACTACAGAGGACCGCCAACTATTAGAGACACCCAGTGCTTCTCAGCCCGTCTCTGCAGGGAAGTCGATCCATCCTAGTTCTCCCTCTAAGAGTCGCTGTAAGGTGTGTGGGAAAATGTTTCTCATGAAAAGCTATTTCTTTAAACATGTGAGAATGCACACCAAGATGAGAGAACGTGTCTGTGGGGTGTGTGGAAAACAGGTTGAGTTAGAGGCTCTAAAAGATCACGTTCAAGCTCACATCGATGCTCAGTTTACTTGTCAGTTCTGCAGTAAGTGTTTCACTAAGAATAATGCTCTGAGGTTACACATGAGgatccacacaggggagaaaccctaccgCTGTTCTGTCTGCGGCAGAGGGTTCGCAGGAGCAACCAATCTAACCAATCACATGAGGATCCACACAGGGTATAAACCCCACCGCTGTACTGAGTGTGGACGGTGTTTCTCTGTCCTGGGTCATCTCCAGACACACATGAGGAGCCACACGGGGGAGAAACCCTACCGGTGTACTGTCTGTGGTAAAGGGTTTAGTGTGAGCTGCAACCTGACGCAGCACATGAtgatacacacaggggagagaccTTACCACTGTCCTGACTGTCAGAAAGGATTCATCACCATGGTCCGGCTGAGGAGACATCAGATCGCTGTTCACATGCAGGGAGCAATGTTCTTCTGTAATGAGCAACAGCTGTAAAAGCATGCAGGCCTTGAAacacacagtagagtacagagagagagacagcgatgaCATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacaacgATAACATGATGAGCCCTGACgtaagacacagagagacagcgatgacgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGACCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACGTAAGACATAGAGACAGCGATGACATGATGAGCCCTGAcgtaagacacagagacagcaatgACATGATGTGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGAcgtaagacacagagacagagagacagcgatgaCATGATGAGCCCTGAcgtaagacacagagacagagagacagcgatgaCATGATGAGCCCTGACgtaagacacagagagacagcgatgacgtaagacacacagagagactagcTTCCACCTGTAAGAGGAGACTTCTTGGTGAATAAGACATGACTGAACTGCTGGACTTCAGATTTAACAGAGAAGTTGGTGGACCGTATCTTCTGAGCAACAGAAGTCCCTGATCATTAGTTAGAACAGTTGGTTCTCAGACTGTTTGGGGCCTGGGACCCCTTCTGTGTGAGTAAATTCATCAGGGACACCCTCATCAGAACACAACTAGAGTGAGATATGAAATAGCATACAAGGAATTTTACTGTGACTTTGGCAGTGCATTGTGGGACAAACCAAGTCCCCgggaaggaacattttaaaaggcATCACAGAAAGAAATGAGCAGTTTTCAAGCTAATTTCCATGTACTGTCATCTGTTGTTGAGAGTAAAACATATTGTTTATATACTGTCACCTGTATTGTCACATCTGCTTAATATTGCTAACCTTAAATCTACAATGATTGGGGATCTTTCACTATTCTACCTATTTGACTTTAACTTGAGaataaaatgtgttgttttaaatAGTGTAA
>XM_036973247.1
ttttgaagccCAAAACCGGAAGTGACGTTGACTCTACGTCCTGTTTTCTAAACGCAAAGAATACACTGCTAGTTTATAAGCTTAATTTAGCTATTCACTACGAAGTTTAAAATGTCTAGAATAGAACTATTACGGTCGTTTTTCAACCAGAGATTAGCAGCTGCTGCCGAAGAGATATTCCGGGTCGTGGAGAAAACGATAGCCGAGTACCAGGACGAGATGTCCCGCTCGGAAGAGAGGAACAGCCGTCTACAGAAGCTGCTCGATATCACTATTAAACCAGAAATAAAGTTGTATAGAGCAGACGCTAATTAATTTCAGATCCCAGATCAGCAGTGCCTATTGATGAGTTTCAATCTTCCGGACACCCAGCTGCAGCAGCTCCCAGCCTGTGGAGAACAGGTTCCCTCTGAGCAGGAGGAGTGGATCCACAGTCTGGGGCAGGAGGATCCACAGTCTGGGCCAGGAGGATCCACAGTCTGGAGCAGGAGGATCCACAGTCTGGGGCAGGAGGATCCACAGCCCGTTCACATTAAAGAGGAACAGCAGGAACTCTGGACCAGTCTGGGGGAAGGTCAGGAGTCTGACACCACAGAGTTCATATTCACTTCCGCTTGTGTGCAAAGTGACTGTAATCAGGACCCACCTCAGCCCTCACATCTCTACCAGACCCAGAGTACCAGCACCTCATATGAACAGTTGAAAAGAGGAACTACAGAGGACCGCCAACTATTAGAGACACCCAGTGCTTCTCAGCCCGTCTCTGCAGGGAAGTCGATCCATCCTAGTTCTCCCTCTAAGAGTCGCTGTAAGGTGTGTGGGAAAATGTTTCTCATGAAAAGCTATTTCTTTAAACATGTGAGAATGCACACCAAGATGAGAGAACGTGTCTGTGGGGTGTGTGGAAAACAGGTTGAGTTAGAGGCTCTAAAAGATCACGTTCAAGCTCACATCGATGCTCAGTTTACTTGTCAGTTCTGCAGTAAGTGTTTCACTAAGAATAATGCTCTGAGGTTACACATGAGgatccacacaggggagaaaccctaccgCTGTTCTGTCTGCGGCAGAGGGTTCGCAGGAGCAACCAATCTAACCAATCACATGAGGATCCACACAGGGTATAAACCCCACCGCTGTACTGAGTGTGGACGGTGTTTCTCTGTCCTGGGTCATCTCCAGACACACATGAGGAGCCACACGGGGGAGAAACCCTACCGGTGTACTGTCTGTGGTAAAGGGTTTAGTGTGAGCTGCAACCTGACGCAGCACATGAtgatacacacaggggagagaccTTACCACTGTCCTGACTGTCAGAAAGGATTCATCACCATGGTCCGGCTGAGGAGACATCAGATCGCTGTTCACATGCAGGGAGCAATGTTCTTCTGTAATGAGCAACAGCTGTAAAAGCATGCAGGCCTTGAAacacacagtagagtacagagagagagacagcgatgaCATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacaacgATAACATGATGAGCCCTGACgtaagacacagagagacagcgatgacgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGACCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACGTAAGACATAGAGACAGCGATGACATGATGAGCCCTGAcgtaagacacagagacagcaatgACATGATGTGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGAcgtaagacacagagacagagagacagcgatgaCATGATGAGCCCTGAcgtaagacacagagacagagagacagcgatgaCATGATGAGCCCTGACgtaagacacagagagacagcgatgacgtaagacacacagagagactagcTTCCACCTGTAAGAGGAGACTTCTTGGTGAATAAGACATGACTGAACTGCTGGACTTCAGATTTAACAGAGAAGTTGGTGGACCGTATCTTCTGAGCAACAGAAGTCCCTGATCATTAGTTAGAACAGTTGGTTCTCAGACTGTTTGGGGCCTGGGACCCCTTCTGTGTGAGTAAATTCATCAGGGACACCCTCATCAGAACACAACTAGAGTGAGATATGAAATAGCATACAAGGAATTTTACTGTGACTTTGGCAGTGCATTGTGGGACAAACCAAGTCCCCgggaaggaacattttaaaaggcATCACAGAAAGAAATGAGCAGTTTTCAAGCTAATTTCCATGTACTGTCATCTGTTGTTGAGAGTAAAACATATTGTTTATATACTGTCACCTGTATTGTCACATCTGCTTAATATTGCTAACCTTAAATCTACAATGATTGGGGATCTTTCACTATTCTACCTATTTGACTTTAACTTGAGaataaaatgtgttgttttaaatAGTGTAA
>XR_005042079.1
ttttgaagccCAAAACCGGAAGTGACGTTGACTCTACGTCCTGTTTTCTAAACGCAAAGAATACACTGCTAGTTTATAAGCTTAATTTAGCTATTCACTACGAAGTTTAAAATGTCTAGAATAGAACTATTACGGTCGTTTTTCAACCAGAGATTAGCAGCTGCTGCCGAAGAGATATTCCGGGTCGTGGAGAAAACGATAGCCGAGTACCAGGACGAGATGTCCCGCTCGGAAGAGAGGAACAGCCGTCTACAGAAGCTGCTCGATATCACTATTAAACCAGAAATAAAGTTGTATAGAGCAGACACCCAGCTGCAGCAGCTCCCAGCCTGTGGAGAACAGGTTCCCTCTGAGCAGGAGGAGTGGATCCACAGTCTGGGGCAGGAGGATCCACAGTCTGGGCCAGGAGGATCCACAGTCTGGAGCAGGAGGATCCACAGTCTGGGGCAGGAGGATCCACAGCCCGTTCACATTAAAGAGGAACAGCAGGAACTCTGGACCAGTCTGGGGGAAGGTCAGGAGTCTGACACCACAGAGTTCATATTCACTTCCGCTTGTGTGCAAAGTGACTGTAATCAGGACCCACCTCAGCCCTCACATCTCTACCAGACCCAGAGTACCAGCACCTCATATGAACAGTTGAAAAGAGGAACTACAGAGGACCGCCAACTATTAGAGACACCCAGTGCTTCTCAGCCCGTCTCTGCAGGGAAGTCGATCCATCCTAGTTCTCCCTCTAAGAGTCGCTGTAAGGTGTGTGGGAAAATGTTTCTCATGAAAAGCTATTTCTTTAAACATGTGAGAATGCACACCAAGATGAGAGAACGTGTCTGTGGGGTGTGTGGAAAACAGGTTGAGTTAGAGGCTCTAAAAGATCACGTTCAAGCTCACATCGATGCTCAGTTTACTTGTCAGTTCTGCAGTAAGTGTTTCACTAAGAATAATGCTCTGAGGTTACACATGAGgatccacacaggggagaaaccctaccgCTGTTCTGTCTGCGGCAGAGGGTTCGCAGGAGCAACCAATCTAACCAATCACATGAGGATCCACACAGGGTATAAACCCCACCGCTGTACTGAGTGTGGACGGTGTTTCTCTGTCCTGGGTCATCTCCAGACACACATGAGGAGCCACACGGGGGAGAAACCCTACCGGTGTACTGTCTGTGGTAAAGGGTTTAGTGTGAGCTGCAACCTGACGCAGCACATGAtgatacacacaggggagagaccTTACCACTGTCCTGACTGTCAGAAAGGATTCATCACCATGGTCCGGCTGAGGAGACATCAGATCGCTGTTCACATGCAGGGAGCAATGTTCTTCTGTAATGAGCAACAGCTGTAAAAGCATGCAGGCCTTGAAacacacagtagagtacagagagagagacagcgatgaCATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacaacgATAACATGATGAGCCCTGACgtaagacacagagagacagcgatgacgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGACCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGACGTAAGACATAGAGACAGCGATGACATGATGAGCCCTGAcgtaagacacagagacagcaatgACATGATGTGCCCTGACgtaagacacagagagacagcgatgACATGATGAGCCCTGAcgtaagacacagagacagagagacagcgatgaCATGATGAGCCCTGAcgtaagacacagagacagagagacagcgatgaCATGATGAGCCCTGACgtaagacacagagagacagcgatgacgtaagacacacagagagactagcTTCCACCTGTAAGAGGAGACTTCTTGGTGAATAAGACATGACTGAACTGCTGGACTTCAGATTTAACAGAGAAGTTGGTGGACCGTATCTTCTGAGCAACAGAAGTCCCTGATCATTAGTTAGAACAGTTGGTTCTCAGACTGTTTGGGGCCTGGGACCCCTTCTGTGTGAGTAAATTCATCAGGGACACCCTCATCAGAACACAACTAGAGTGAGATATGAAATAGCATACAAGGAATTTTACTGTGACTTTGGCAGTGCATTGTGGGACAAACCAAGTCCCCgggaaggaacattttaaaaggcATCACAGAAAGAAATGAGCAGTTTTCAAGCTAATTTCCATGTACTGTCATCTGTTGTTGAGAGTAAAACATATTGTTTATATACTGTCACCTGTATTGTCACATCTGCTTAATATTGCTAACCTTAAATCTACAATGATTGGGGATCTTTCACTATTCTACCTATTTGACTTTAACTTGAGaataaaatgtgttgttttaaatAGTGTAA
>TU2698656
CGTTCATAGACGCTAATTAATTTCAGATCCCAGATCAGCAGTGCCTATTGATGAGTTTCAATCTTCCGGGTGGGTTTTGTTGTTCGGTCTGAAGGAGAACAAACATAGCTTGGGATACGGTTTTGGAAACAAGGAACGTATCTTTTATATCAGCAATAAATACTTTTTCAAAAAGCATAAGGTTAAATAGAGTACCACAGtgtgagtcataatacccataaaacctagcagtcaaaaaaaggaaatggttccaattgtttttccacaaTGTTTCCCATAGTGGATTTTAGAAACATTTAAATTAAGGGTGGTGTTTCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036973246.1 False 2555 mRNA 0.47 2 78343 83632
XM_036973247.1 False 2615 mRNA 0.47 3 78343 83632
XR_005042079.1 False 2514 mRNA 0.47 3 78343 83632
TU2698656 True 319 lncRNA 0.36 1 82776 83094

Neighbor

gene id symbol gene type direction distance location
ldlrad4b LOC106591938 coding upstream 104971 188603 ~ 228256 (-)
LOC110511365 LOC106594566 coding upstream 213903 297535 ~ 411847 (-)
LOC118948224 NA coding upstream 347665 430891 ~ 436046 (-)
G2353714 NA non-coding downstream 10526 66195 ~ 67817 (-)
G2353711 NA non-coding downstream 13142 64958 ~ 65201 (-)
G2353707 NA non-coding downstream 20568 57535 ~ 57775 (-)
G2353704 NA non-coding downstream 21986 56129 ~ 56357 (-)
G2353700 NA non-coding downstream 23251 53046 ~ 55092 (-)
G2353805 NA non-coding upstream 24840 108472 ~ 109035 (-)
G2353816 NA non-coding upstream 38519 122151 ~ 127236 (-)
G2353828 NA non-coding upstream 59357 142989 ~ 143206 (-)
G2353840 NA non-coding upstream 115892 199524 ~ 200303 (-)
G2353843 NA non-coding upstream 122735 206367 ~ 207462 (-)
G2354057 NA other upstream 451648 535280 ~ 536850 (-)

Expression


Co-expression Network