G2354070 (LOC106581475)


Basic Information

Item Value
gene id G2354070
gene name LOC106581475
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NW_023493695.1
NCBI id JAAXML020000753.1
chromosome length 522437
location 55976 ~ 56797 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2699129
gcgccagtggagaatttgccaatcttggtgttctctggcaatagccaaacgtcctgcacggtgttgggctgtaagtcCCCCacttgtggacgtcgggccctcataccaccctcatttgagcagacacatgcacatttgtggcctgctggaggtcattttgcagggctctggcagtgctcctcctgctcctccttgcacaaaggcggaggtagcggccatgctgctgggttgttgcactcatacggcctcctccacgtctcctgatgtactggcctgtctcctggtagcgcctccatgctctggaaactacgctgacagacacagcaaaccttcttgccacagctcgcattgatgtgccatcctggatgagctgcactacctgagccacttgtgtgggttgtagactccatctcatgctaccactagagtgaaagcaccgccagcattcaaaagtgaccaaaacatcagccaggaagcataggaactgagaagtggtctgtggtcaccacctgcagaaccactcctttattgggagtgtcttcctaattgcctataatttccacctgctgtctattccatttgcacaacagcatgtgaaatttattgtcaatcggtgttgcttcctaagtggacagtttgatttcacagaagtgtgattgacttggagttacattgtgttgtttaagtgtttcctttacttttttgagcagtgtatatataggtagatatatagatatatagatattaactttatatattatctacctcacttgctttggcaatgttaacacgtttcccatgccaataaagcccttgaattga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2699129 True 822 lncRNA 0.48 1 55976 56797
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118948229 LOC106602031 coding upstream 2755 27135 ~ 53221 (+)
LOC110496442 LOC106602030 coding downstream 35530 73512 ~ 97185 (+)
LOC110487098 LOC106606326 coding downstream 137886 194683 ~ 196751 (+)
LOC118948226 NA coding downstream 196969 253192 ~ 289452 (+)
LOC118948225 NA coding downstream 326659 383348 ~ 385108 (+)
G2354071 NA non-coding upstream 16163 39438 ~ 39813 (+)
G2354073 NA non-coding downstream 1810 58607 ~ 58817 (+)
G2354079 NA non-coding downstream 7973 64770 ~ 65017 (+)
G2354091 NA non-coding downstream 66890 123687 ~ 125252 (+)
G2354093 NA non-coding downstream 72598 129395 ~ 180924 (+)
G2354081 NA non-coding downstream 78679 135476 ~ 164237 (+)
G2354171 NA other downstream 157926 214723 ~ 221025 (+)
G2354206 mbl2 other downstream 279240 336037 ~ 340083 (+)
G2354230 NA other downstream 345648 402445 ~ 403147 (+)

Expression

G2354070(LOC106581475) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G2354070(LOC106581475) Expression in each Bioproject

Bar chart with 20 bars.
G2354070(LOC106581475) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
End of interactive chart.

Co-expression Network