XLOC_004273 (cacna1da)


Basic Information

Item Value
gene id XLOC_004273
gene name cacna1da
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 36793473 ~ 36964002 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008166
TGCCAGCCTGTTGGTGAGATCCTCCGCTCCAGCGCCCACCCCTGTGCCCTCTCCCCTGGCAGGCCCATGCAGGTGGACGCCCCGCTCAGGCCCACGCCCGCACCATGAGCGCCAACGGCCCTGCTCCGCCTGCTGCGACTCCTGCCGCGCCCCCAGCAGCTGCCGTGCCTGTACCTTCGGTGGTACCGGTCGGATCGCTGGCCCAGAAGAAGCGGGCGCAGTATGCCAAGAGCAAAAAACAGGGCAGTTCGGCCAATACGCGGCCACAGAGAGCTCTCTTCTGCCTCAACCTCAACAACCCCATCCGCCGGGCCTGTATCAGCCTTGTGGAATGGAAGCCATTTGATATCTTTATATTGATAGCGATTTTCGCCAACTGCATGGCCTTAGCTGTATATGTCCCTTTCCCCGAGGATGATTCCAACTCAACCAACCACGACCTGGAAACAGTCGAATATGCCTTCCTTATCATTTTCACGATCGAAACCTTCCTGAAGATTATAGCGTACGGCTTGGTGATGCATCAGAACGCTTATGTCCGGAATGGATGGAACATGCTGGATTTCGTCATTGTCGTCATTGGattGTTTAGTGTTGTCTTGGAAGTGCTGACCAAAGAAGGGGGTGAGAAGGAAGAAGTTGGAGAAAATCTCTCCGCTCATGGCCATGGAGGAAAACCAGGAGGTTTCGATGTTAAAGCCCTCAGAGCCTTTCGAGTGCTGCGACCGCTTCGCCTGGTCTCAGGAGTGCCCAGTTTACAGGTGGTGCTGAACTCCATCATTAAAGCCATGGTTCCTCTCCTCCACATCGCCCTGCTGGTTCTGTTTGTCATCATCATCTATGCTATTATCGGTTTGGAGCTTTTCATTGGAAAAATGCACGCTTCCTGTTATTTCCAAGGGACAGATATTTTAGAGGATGAACCGGCACCGTGTGCGGTGAATGGTCACGGCCGCACATGCCCCATTAACGGCACTCTGTGTAAAGAAGGCTGGCAAGGACCCAACGGAGGCATCACCAACTTCGACAACTTCATGTTCGCCATGCTCACTGTGTTTCAATGCATTACCATGGAGGGCTGGACGGACGTGCTTTATTGGATGAATGATGCTATGGGTTTGGAGCTGCCCTGGGTGTACTTTGTGAGTTTGGTGATCTTCGGCTCTTTCTTCGTCTTGAACCTGGTTCTGGGTGTGTTGAGCGGAGAGTTCTCTAAAGAGCGAGAGAAGGCGAAGGCTCGTGGAGATTTCCAGAAGCTTCGAGAGAAACAGCAGCTGGAGGAAGATCTGAAAGGTTATCTGGACTGGATCACGCAGGCTGAGGACATCGACCCTGAGAacgaggaggaagaggaggagagcaAACGCAACCCGAGTATGCCGGCAAGTGAGACTGAATCCATGAATACAGAGAACGAGAAAGGAGAAGATGAGAAGGCGACATGTTGCGGCCCGACATGTCAAAAAATATCAAAATCAAAGTTCAGTCGGCGCTGGCGTCGCTGGAACCGGTTGTGTCGGAGGAATTGTCGCTTGGCTGTAAAATCTGTGCCATTCTATTGGCTGGTAATCATCCTGGTGTTCCTGAACACTTTGACCATCTCTTCAGAACATTACAACCAGCCCATGTGGCTCACACAAGTACAGGATGTGGCTAATAAAGTGCTGCTGGCCATGTTCACGTGTGAGATGTTGGTGAAGATGTACAGTCTGGGCCTGCAGGCTTattttgtgtctctttttaatCGCTTTGACTGCTTTGTGGTGTGTGGAGGCATCACTGAAACCATCCTTGTGGAGTTTGAGATTATGTCACCCCTCGGCATCTCAGTGTTTCGATGTGTTCGACTTCTCAGGATCTTTAAAGTTACACGCCACTGGGCGTCTCTCAGTAACCTGGTGGCATCTCTGCTGAACTCCATGAAGTCCATTGCTTCTCTACTGCTGCTGctcttcctcttcatcatcatctttagCCTCCTCGGTATGCAGGTGTTCGGCGGCAAGTTTAACTTTGACGAGACACAAACCAAGAGGAGCACCTTTGACAACTTCCCTCAGGCCTTGCTCACTGTGTTTCAGATTCTAACTGGTGAAGACTGGAATGCCGTCATGTATGACGGAATTATGGCGTACGGCGGCCCTTCGTCATCAGGAATGATTGTGTGCATATACTTCATCATCCTTTTCATCTGTGGAAACTACATTCTCCTGAATGTGTTCTTGGCTATCGCTGTGGACAATCTTGCTGATGCAGAGTCTCTGAACACGGACGATACGAAGAAACCTGATGAAATCGACGAAATTGAAGATGAAGCCAAGGCTGGAGAGGAGGATGAGAAGGATAATGCCGAGGAGGATGAAGAAGAGCCAGATGTTCCTGCAGGGCCTCGTCCAAAGATCTCAGAGCTTGTTAAGAAGGAGAAGATCACTCCAATCCCAGAGGGCAGTGCGTTCTTCATCTTCAGCAACACAAACCCAGTTCGAGTCGCCTGCCACAAGCTGATAAACCACCACATCTTCACCAACCTCATCCTTGTGTTCATTATGCTAAGCTCAGCGTCATTGGCTGCTGAGGATCCAATCAGAAACTTCTCTGCTAGGAATATTGTCCTAGGCTATGCAGATTATGTCTTCACTAGTATGTTTACATTTGAGATCGTGTTAAAGATGACCACGTATGGCGCTTTTCTCCATAAGGGTGCTTTCTGCAGGAACTACTTTAATCTTCTAGATCTGCTGGTGGTCGGAGTTTCGCTCGTGTCCTTCGGGATTCAATCATCGGCCATCTCAGTGGTGAAGATTCTGAGGGTTCTGAGAGTTTTGCGTCCACTCAGAGCCATAAACAGAGCTAAAGGACTAAAGCATGTGgtccagtgtgtgtttgtggccATCAGGACTATAGGAAACATCATGATCGTCACCACTCTGCTGCAGTTTATGTTCGCCTGCATTGGTGTCCAGCTCTTCAAGGGAAAGTTTTACCGTTGTAACGATGAGGCCAAGTCCAGCCCAGAGGAGTGCAAgggaacGTACATCATGTATAAGGAAGGAGACGTGAACCAGCCAATCATTCAGAAGCGCCACTGGCACAACAGTGATTTCAACTTTGACAATGTGCTCATGGCCATGATGGCTCTGTTCACCGTGTCCACGTTTGAAGGCTGGCCAGCGTTGCTGTACAAGGCCATCGACTCCAACCGGGAGAACATGGGTCCCATCTACAACTACCGAGTGGAGATTTCCATCTTCTTCATCATCTACATCATCATCATCGCTTTCTTTATGATGAACATCTTTGTGGGTTTCGTCATCGTGACCTTTCAGGAACAGGGAGAGAAGGAGTACAAGAACTGTGAGCTGGACAAGAACCAGcgtcAGTGTGTGGAGTATGCATTGAAAGCACGTCCTCTCAGGAGGTACATCCCAAAGAACCCATATCAGTATAAGTTCTGGTATGTGGTGAACTCCACCGGCTTCGAGTACATCATGTTTGTCCTGATTTTACTCAACACCATCTGTCTCGCCGTGCAGCACTATGGTCAGTCTGAGCTCTTCAATTATGTTATGGACATTCTGAATATGGTCTTCACTGCCGTCTTCACTGTGGAGATGGTGCTCAAGCTGATCGCCTTCAAGCCTCGGCATTATTTCACTGACGCATGGAACACATTTGACGCCTTAATTGTTGTCGGTAGCGTCGTAGATATTGCTATCACTGAAGTCAACCCCACAGAGGCACCTCAGGTGGATGAGTCGGGGAACACTGAGGACAGCGCTCGCATTTCCATCACTTTCTTCCGTCTTTTTCGAGTGATGCGATTGGTCAAGCTGCTGAGCAGAGGGGAGGGAATTCGAACCCTACTCTGGACCTTTATCAAATCCTTCCAGGCACTGCCTTATGTTGCTTTGCTGATAGCCATGCTCTTCTTCATCTACGCTGTCATTGGCATGCAGGTGTTTGGGAAAATTGCCATGGTGGATCACACTCAAATCAACAGGAACAACAACTTTCAGACGTTCCCTCAGGCTGTGCTTCTGCTCTTCAGGTGTGCTACGGGTGAAGCCTGGCAGGAGATCATGTTAGCATGTATGCCAGGCAAGCTGTGTGACCCGGAGTCAGACTATAATCCTGGGGAAGAAATGACCTGCGGGAGCAGTTTCGCCATCATCTACTTCATCACCTTCTACATGCTCTGCGCCTTCCTGATCATTAACCTGTTTGTGGCTGTCATCATGGACAACTTCGACTATCTGACCCGTGATTGGTCAATTCTGGGGCCACATCACCTTGATGAGTTTAAGAGGATTTGGTCAGAATATGACCCAGAGGCCAAGGGCAGAATAAAACATCTTGATGTAGTGACGTTGTTGCGCCGTATTCAGCCTCCTCTCGGCTTTGGGAAACTCTGTCCTCATAGAGTCGCCTGCAAGAGGCTGGTGGCTATGAACATGCCCCTGAACAGTGACGGCACGGTCATGTTTAACGCGACACTGTTTGCTCTCGTGAGAACCGCATTGAAAATCAAAACAGAAGgtaACCTAGAACAAGCGAATGAAGAGCTCCGAGCTGTGATTAAGAAGATCTGGAAGAGAACCAGCATGAAGCTTCTGGATCAAGTGGTTCCCCCTGCTGGTGATGATGAGGTAACGGTGGGGAAGTTCTATGCCACTTTCCTGATACAGGACTACTTTAGGAAATTCAAGAAACGCAAAGAGGAAGGCCTGGTGGGAGTTCATCCGGCACAGAACAACACGGCCATCGCACTGCAGGCTGGCCTTCGTACGCTGCATGACATTGGGCCAGAAATCCGCCGTGCGATATCATGTGACCTGCAGGATGATGAGCTAGTAGACTTTATACCAGAGGAGGACGAAGAAATTTATAGGCGAAACGGAGGACTCTTTGGCAACCACATCAACCACATAAACGGAGACCCCCGGAGGAGCTCTGGCCACCAAACAAACGCCACACAGCGCCCCCTGCAGGTGCAGCCGCCCCCACATTACGTCCACATGGAGCAGCCCGTGGGGCGTCTGGGTCGCGCCAATGCCATGGCACAGCAAAACCATCATcgtcaccaccaccaccatcaccatcatcatcatcacaacaACTCCTACAACAAATCGCCCAAGTCCACCAACATCAACCTCAACAACGCCAACGTGTCCAGTTTACCCAATGGTGGACACAATCGCTACTACGAACACGCTCCCGCTAATGGCTACCCAGGGTCATATTACGGAGAATACGACAAGCCCAGGACCCCTCATGGGCAAAGaaGGCGCTACTATGAGACATATATTAGATCGCAGGGCAGCGACAGAAGACGACCCACGATACGCCGCGAAGAGGAGTATGAAGAAGATCGCTACTCTGGAGAGTATTACAGCGGAGAGGAGTTTTATGAAGATGACAGCATGCTATCGGGTGATAGGTACCCCAACAGTGACCAGGAGTACGAGACGCCGCGGGGTTACCATCATCCTGACAGTTACTATGAAGATGATGAGCAGCCCCTTTATCACGATTCACATAGGTCACCAAAGAGAAGACTGCTTCCTCCAACACCGCAAGGTAATCGGAGACCGTCGTTCAATTTTGAGTGTCTGCGCAGACAGAGCAGTCAAGACGATCTTCCTCACCAGCGAACTGCTCTTCCGTTACATCTCATGCAACACCAGgtGATGGCAGTGGCGGGTCTGGACTCTAGCAGGGCTCACAGGCTTTCACCAACTCGATCTACCAGATCATGGGCTTCACCTCCTCCAACTCCTGCAAGTAAAGACCGGACGCCGTACTACACACCGCTCATCCGCGTGGACCGTCCTCTAAGAGACAGCGCCAGCAGCAGCCATTCATCCATCAGGAAGAGCTCGTGGTACACAGACGACCCTGAGTACCAGCAGAGGAACTTCTCACCTGTTCACCTGCAGGTCCCACCCGAGTACAGGAACCAGTACCTGCAGAAGAGAGGCAGCGCTACCAGCCTGGTGGAGGCGGTCTTGATATCAGAAGGACTGGGTCGATACGCCAAGGATCCCAAATTTGTGGCCGCCACAAAGCATGAGATTGCGGACGCGTGCGAGATGACCATTGACGAAATGGAAAGCGCCGCCAGCCATCTTCTTAACGGTGGCATTACACCAGTAGTCAACGGAGTCAATGTGTTTCCCATACTGGGCCACAGAGACTACGAGCTGCAGGACGTCTCGGCGAGCTACAGCGACGAGGAGCCCGAACCCGAGCCCAGACCTCGTTACGAGGAGGACCTTGCAGATGAAATGATATGCATTACCACTTTATAGCACCTGGTTTGCTAAAAACTGATTTAgcgaaacaaacaaatataaagtttatttattggCTTACTACCTAAAGAAGTGCCTTCACAGCAGAGCAGAAAGGCACCACAGGA
>TCONS_00008167
TCGGAGTTTTATCTCTGGATATAAGccgaatcatcatcatcatcctcagctGAAAGGAAAGACCTCATCAAAGAGGCAAATTATGCCAGCAGTACCAGAGTCCCTGTCTCTGGTGACGTGCCAGCCTGTTGGTGAGATCCTCCGCTCCAGCGCCCACCCCTGTGCCCTCTCCCCTGGCAGGCCCATGCAGGTGGACGCCCCGCTCAGGCCCACGCCCGCACCATGAGCGCCAACGGCCCTGCTCCGCCTGCTGCGACTCCTGCCGCGCCCCCAGCAGCTGCCGTGCCTGTACCTTCGGTGGTACCGGTCGGATCGCTGGCCCAGAAGAAGCGGGCGCAGTATGCCAAGAGCAAAAAACAGGGCAGTTCGGCCAATACGCGGCCACAGAGAGCTCTCTTCTGCCTCAACCTCAACAACCCCATCCGCCGGGCCTGTATCAGCCTTGTGGAATGGAAGCCATTTGATATCTTTATATTGATAGCGATTTTCGCCAACTGCATGGCCTTAGCTGTATATGTCCCTTTCCCCGAGGATGATTCCAACTCAACCAACCACGACCTGGAAACAGTCGAATATGCCTTCCTTATCATTTTCACGATCGAAACCTTCCTGAAGATTATAGCGTACGGCTTGGTGATGCATCAGAACGCTTATGTCCGGAATGGATGGAACATGCTGGATTTCGTCATTGTCGTCATTGGattGTTTAGTGTTGTCTTGGAAGTGCTGACCAAAGAAGGGGGTGAGAAGGAAGAAGTTGGAGAAAATCTCTCCGCTCATGGCCATGGAGGAAAACCAGGAGGTTTCGATGTTAAAGCCCTCAGAGCCTTTCGAGTGCTGCGACCGCTTCGCCTGGTCTCAGGAGTGCCCAGTTTACAGGTGGTGCTGAACTCCATCATTAAAGCCATGGTTCCTCTCCTCCACATCGCCCTGCTGGTTCTGTTTGTCATCATCATCTATGCTATTATCGGTTTGGAGCTTTTCATTGGAAAAATGCACGCTTCCTGTTATTTCCAAGGGACAGATATTTTAGAGGATGAACCGGCACCGTGTGCGGTGAATGGTCACGGCCGCACATGCCCCATTAACGGCACTCTGTGTAAAGAAGGCTGGCAAGGACCCAACGGAGGCATCACCAACTTCGACAACTTCATGTTCGCCATGCTCACTGTGTTTCAATGCATTACCATGGAGGGCTGGACGGACGTGCTTTATTGGATGAATGATGCTATGGGTTTGGAGCTGCCCTGGGTGTACTTTGTGAGTTTGGTGATCTTCGGCTCTTTCTTCGTCTTGAACCTGGTTCTGGGTGTGTTGAGCGGAGAGTTCTCTAAAGAGCGAGAGAAGGCGAAGGCTCGTGGAGATTTCCAGAAGCTTCGAGAGAAACAGCAGCTGGAGGAAGATCTGAAAGGTTATCTGGACTGGATCACGCAGGCTGAGGACATCGACCCTGAGAacgaggaggaagaggaggagagcaAACGCAACCGGGTTACACTTGCCAGCCTCatggagaagaagaagaaggggtTTGGCTGGTTCAGCCAGTCCTCTGACACTCATGCGAGTATGCCGGCAAGTGAGACTGAATCCATGAATACAGAGAACGAGAAAGGAGAAGATGAGAAGGCGACATGTTGCGGCCCGACATGTCAAAAAATATCAAAATCAAAGTTCAGTCGGCGCTGGCGTCGCTGGAACCGGTTGTGTCGGAGGAATTGTCGCTTGGCTGTAAAATCTGTGCCATTCTATTGGCTGGTAATCATCCTGGTGTTCCTGAACACTTTGACCATCTCTTCAGAACATTACAACCAGCCCATGTGGCTCACACAAGTACAGGATGTGGCTAATAAAGTGCTGCTGGCCATGTTCACGTGTGAGATGTTGGTGAAGATGTACAGTCTGGGCCTGCAGGCTTattttgtgtctctttttaatCGCTTTGACTGCTTTGTGGTGTGTGGAGGCATCACTGAAACCATCCTTGTGGAGTTTGAGATTATGTCACCCCTCGGCATCTCAGTGTTTCGATGTGTTCGACTTCTCAGGATCTTTAAAGTTACACGCCACTGGGCGTCTCTCAGTAACCTGGTGGCATCTCTGCTGAACTCCATGAAGTCCATTGCTTCTCTACTGCTGCTGctcttcctcttcatcatcatctttagCCTCCTCGGTATGCAGGTGTTCGGCGGCAAGTTTAACTTTGACGAGACACAAACCAAGAGGAGCACCTTTGACAACTTCCCTCAGGCCTTGCTCACTGTGTTTCAGATTCTAACTGGTGAAGACTGGAATGCCGTCATGTATGACGGAATTATGGCGTACGGCGGCCCTTCGTCATCAGGAATGATTGTGTGCATATACTTCATCATCCTTTTCATCTGTGGAAACTACATTCTCCTGAATGTGTTCTTGGCTATCGCTGTGGACAATCTTGCTGATGCAGAGTCTCTGAACACGGACGATACGAAGAAACCTGATGAAATCGACGAAATTGAAGATGAAGCCAAGGCTGGAGAGGAGGATGAGAAGGATAATGCCGAGGAGGATGAAGAAGAGCCAGATGTTCCTGCAGGGCCTCGTCCAAAGATCTCAGAGCTTGTTAAGAAGGAGAAGATCACTCCAATCCCAGAGGGCAGTGCGTTCTTCATCTTCAGCAACACAAACCCAGTTCGAGTCGCCTGCCACAAGCTGATAAACCACCACATCTTCACCAACCTCATCCTTGTGTTCATTATGCTAAGCTCAGCGTCATTGGCTGCTGAGGATCCAATCAGAAACTTCTCTGCTAGGAATATTATACTTGGTTACTTTGACTATGCTTTCACGGCTATCTTTACTGTAGAGATCGTGTTAAAGATGACCACGTATGGCGCTTTTCTCCATAAGGGTGCTTTCTGCAGGAACTACTTTAATCTTCTAGATCTGCTGGTGGTCGGAGTTTCGCTCGTGTCCTTCGGGATTCAATCATCGGCCATCTCAGTGGTGAAGATTCTGAGGGTTCTGAGAGTTTTGCGTCCACTCAGAGCCATAAACAGAGCTAAAGGACTAAAGCATGTGgtccagtgtgtgtttgtggccATCAGGACTATAGGAAACATCATGATCGTCACCACTCTGCTGCAGTTTATGTTCGCCTGCATTGGTGTCCAGCTCTTCAAGGGAAAGTTTTACCGTTGTAACGATGAGGCCAAGTCCAGCCCAGAGGAGTGCAAgggaacGTACATCATGTATAAGGAAGGAGACGTGAACCAGCCAATCATTCAGAAGCGCCACTGGCACAACAGTGATTTCAACTTTGACAATGTGCTCATGGCCATGATGGCTCTGTTCACCGTGTCCACGTTTGAAGGCTGGCCAGCGTTGCTGTACAAGGCCATCGACTCCAACCGGGAGAACATGGGTCCCATCTACAACTACCGAGTGGAGATTTCCATCTTCTTCATCATCTACATCATCATCATCGCTTTCTTTATGATGAACATCTTTGTGGGTTTCGTCATCGTGACCTTTCAGGAACAGGGAGAGAAGGAGTACAAGAACTGTGAGCTGGACAAGAACCAGcgtcAGTGTGTGGAGTATGCATTGAAAGCACGTCCTCTCAGGAGGTACATCCCAAAGAACCCATATCAGTATAAGTTCTGGTATGTGGTGAACTCCACCGGCTTCGAGTACATCATGTTTGTCCTGATTTTACTCAACACCATCTGTCTCGCCGTGCAGCACTATGGTCAGTCTGAGCTCTTCAATTATGTTATGGACATTCTGAATATGGTCTTCACTGCCGTCTTCACTGTGGAGATGGTGCTCAAGCTGATCGCCTTCAAGCCTCGGCATTATTTCACTGACGCATGGAACACATTTGACGCCTTAATTGTTGTCGGTAGCGTCGTAGATATTGCTATCACTGAAGTCAACAACACTGAGGACAGCGCTCGCATTTCCATCACTTTCTTCCGTCTTTTTCGAGTGATGCGATTGGTCAAGCTGCTGAGCAGAGGGGAGGGAATTCGAACCCTACTCTGGACCTTTATCAAATCCTTCCAGGCACTGCCTTATGTTGCTTTGCTGATAGCCATGCTCTTCTTCATCTACGCTGTCATTGGCATGCAGGTGTTTGGGAAAATTGCCATGGTGGATCACACTCAAATCAACAGGAACAACAACTTTCAGACGTTCCCTCAGGCTGTGCTTCTGCTCTTCAGGTGTGCTACGGGTGAAGCCTGGCAGGAGATCATGTTAGCATGTATGCCAGGCAAGCTGTGTGACCCGGAGTCAGACTATAATCCTGGGGAAGAAATGACCTGCGGGAGCAGTTTCGCCATCATCTACTTCATCACCTTCTACATGCTCTGCGCCTTCCTGATCATTAACCTGTTTGTGGCTGTCATCATGGACAACTTCGACTATCTGACCCGTGATTGGTCAATTCTGGGGCCACATCACCTTGATGAGTTTAAGAGGATTTGGTCAGAATATGACCCAGAGGCCAAGGGCAGAATAAAACATCTTGATGTAGTGACGTTGTTGCGCCGTATTCAGCCTCCTCTCGGCTTTGGGAAACTCTGTCCTCATAGAGTCGCCTGCAAGAGGCTGGTGGCTATGAACATGCCCCTGAACAGTGACGGCACGGTCATGTTTAACGCGACACTGTTTGCTCTCGTGAGAACCGCATTGAAAATCAAAACAGAAGgtaACCTAGAACAAGCGAATGAAGAGCTCCGAGCTGTGATTAAGAAGATCTGGAAGAGAACCAGCATGAAGCTTCTGGATCAAGTGGTTCCCCCTGCTGGTGATGATGAGGTAACGGTGGGGAAGTTCTATGCCACTTTCCTGATACAGGACTACTTTAGGAAATTCAAGAAACGCAAAGAGGAAGGCCTGGTGGGAGTTCATCCGGCACAGAACAACACGGCCATCGCACTGCAGGCTGGCCTTCGTACGCTGCATGACATTGGGCCAGAAATCCGCCGTGCGATATCATGTGACCTGCAGGATGATGAGCTAGTAGACTTTATACCAGAGGAGGACGAAGAAATTTATAGGCGAAACGGAGGACTCTTTGGCAACCACATCAACCACATAAACGGAGACCCCCGGAGGAGCTCTGGCCACCAAACAAACGCCACACAGCGCCCCCTGCAGGTGCAGCCGCCCCCACATTACGTCCACATGGAGCAGCCCGTGGGGCGTCTGGGTCGCGCCAATGCCATGGCACAGCAAAACCATCATcgtcaccaccaccaccatcaccatcatcatcatcacaacaACTCCTACAACAAATCGCCCAAGTCCACCAACATCAACCTCAACAACGCCAACGTGTCCAGTTTACCCAATGGTGGACACAATCGCTACTACGAACACGCTCCCGCTAATGGCTACCCAGGGTCATATTACGGAGAATACGACAAGCCCAGGACCCCTCATGGGCAAAGaaGGCGCTACTATGAGACATATATTAGATCGCAGGGCAGCGACAGAAGACGACCCACGATACGCCGCGAAGAGGAGTATGAAGAAGATCGCTACTCTGGAGAGTATTACAGCGGAGAGGAGTTTTATGAAGATGACAGCATGCTATCGGGTGATAGGTACCCCAACAGTGACCAGGAGTACGAGACGCCGCGGGGTTACCATCATCCTGACAGTTACTATGAAGATGATGAGCAGCCCCTTTATCACGATTCACATAGGTCACCAAAGAGAAGACTGCTTCCTCCAACACCGCAAGGTAATCGGAGACCGTCGTTCAATTTTGAGTGTCTGCGCAGACAGAGCAGTCAAGACGATCTTCCTCACCAGCGAACTGCTCTTCCGTTACATCTCATGCAACACCAGgtGATGGCAGTGGCGGGTCTGGACTCTAGCAGGGCTCACAGGCTTTCACCAACTCGATCTACCAGATCATGGGCTTCACCTCCTCCAACTCCTGCAAGTAAAGACCGGACGCCGTACTACACACCGCTCATCCGCGTGGACCGTCCTCTAAGAGACAGCGCCAGCAGCAGCCATTCATCCATCAGGAAGAGCTCGTGGTACACAGACGACCCTGAGTACCAGCAGAGGAACTTCTCACCTGTTCACCTGCAGGTCCCACCCGAGTACAGGAACCAGTACCTGCAGAAGAGAGGCAGCGCTACCAGCCTGGTGGAGGCGGTCTTGATATCAGAAGGACTGGGTCGATACGCCAAGGATCCCAAATTTGTGGCCGCCACAAAGCATGAGATTGCGGACGCGTGCGAGATGACCATTGACGAAATGGAAAGCGCCGCCAGCCATCTTCTTAACGGTGGCATTACACCAGTAGTCAACGGAGTCAATGTGTTTCCCATACTGGGCCACAGAGACTACGAGCTGCAGGACGTCTCGGCGAGCTACAGCGACGAGGAGCCCGAACCCGAGCCCAGACCTCGTTACGAGGAGGACCTTGCAGATGAAATGATATGCATTACCACTTTATAGCACCTGGTTTGCTAAAAACTGATTTAgcgaaac
>TCONS_00008486
CGTTTTAATCGATGTCGGAGTTTTATCTCTGGATATAAGccgaatcatcatcatcatcctcagctGAAAGGAAAGACCTCATCAAAGAGGCAAATTATGCCAGCAGTACCAGAGTCCCTGTCTCTGGTGACGTGCCAGCCTGTTGGTGAGATCCTCCGCTCCAGCGCCCACCCCTGTGCCCTCTCCCCTGGCAGGCCCATGCAGGTGGACGCCCCGCTCAGGCCCACGCCCGCACCATGAGCGCCAACGGCCCTGCTCCGCCTGCTGCGACTCCTGCCGCGCCCCCAGCAGCTGCCGTGCCTGTACCTTCGGTGGTACCGGTCGGATCGCTGGCCCAGAAGAAGCGGGCGCAGTATGCCAAGAGCAAAAAACAGGGCAGTTCGGCCAATACGCGGCCACAGAGAGCTCTCTTCTGCCTCAACCTCAACAACCCCATCCGCCGGGCCTGTATCAGCCTTGTGGAATGGAAGTATCCTTTACTGTTTGTAAAACTGTCAAGAACAACTATAATATTGAAGTGATGGTgatttttgtgtcattatttattcactctttacttgttttaaatctataggagtttctttcttctgtcgcaCACAAAAGAAGGGATGTGgggaaatgttggaaacctgtaaccattgagtttcatagtgtttgttttttcctactatgaaagtctaCTATGATAGTTAcatattttcagctttcttcaaaatatctttttttgtgttcaacagaagaagaaaactcataaaggtttggatccacttgaggggggagtacattttcatttatgggcGAATTATCACCTTAAGgactctaatgctgcgttcacaccag

Function

symbol description
cacna1da Predicted to enable high voltage-gated calcium channel activity. Acts upstream of or within detection of mechanical stimulus involved in sensory perception of sound; neuromuscular process controlling balance; and synapse organization. Located in basal plasma membrane and ribbon synapse. Is expressed in central nervous system; heart; and neuromast. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human CACNA1D (calcium voltage-gated channel subunit alpha1 D).

GO:

id name namespace
GO:0050885 neuromuscular process controlling balance biological_process
GO:0070509 calcium ion import biological_process
GO:0050910 detection of mechanical stimulus involved in sensory perception of sound biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0070588 calcium ion transmembrane transport biological_process
GO:0050974 detection of mechanical stimulus involved in sensory perception biological_process
GO:0055085 transmembrane transport biological_process
GO:0006811 ion transport biological_process
GO:0006816 calcium ion transport biological_process
GO:0050808 synapse organization biological_process
GO:0009925 basal plasma membrane cellular_component
GO:0005891 voltage-gated calcium channel complex cellular_component
GO:0097470 ribbon synapse cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005216 ion channel activity molecular_function
GO:0005244 voltage-gated ion channel activity molecular_function
GO:0005245 voltage-gated calcium channel activity molecular_function
GO:0005262 calcium channel activity molecular_function
GO:0008331 high voltage-gated calcium channel activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030616-135 Predicted to enable high voltage-gated calcium channel activity. Acts upstream of or within detection of mechanical stimulus involved in sensory perception of sound; neuromuscular process controlling balance; and synapse organization. Located in basal plasma membrane and ribbon synapse. Is expressed in central nervous system; heart; and neuromast. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human CACNA1D (calcium voltage-gated channel subunit alpha1 D).

Ensembl:

ensembl_id ENSDARG00000102773

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008166 False 6421 mRNA 0.51 47 36793473 36957127
TCONS_00008167 False 6504 mRNA 0.51 48 36793550 36963988
TCONS_00008486 True 840 lncRNA 0.49 2 36956420 36964002

Neighbor

gene id symbol gene type direction distance location
XLOC_004272 cacna2d3 coding downstream 27639 36688794 ~ 36765834 (-)
XLOC_004269 NA coding downstream 106312 36484392 ~ 36687161 (-)
XLOC_004271 CR457444.8 coding downstream 166151 36620717 ~ 36627322 (-)
XLOC_004270 NA coding downstream 224207 36568924 ~ 36569266 (-)
XLOC_004268 zbtb40 coding downstream 318349 36422233 ~ 36475124 (-)
XLOC_004274 BX248521.2 coding upstream 46159 37010161 ~ 37015507 (-)
XLOC_004275 BX248521.1 coding upstream 74418 37038420 ~ 37044539 (-)
XLOC_004276 NA coding upstream 121618 37085620 ~ 37095534 (-)
XLOC_004277 NINJ1 coding upstream 141638 37105640 ~ 37120954 (-)
XLOC_004278 CR352285.1 coding upstream 333499 37297501 ~ 37298097 (-)
XLOC_004063 CR854846.1 misc downstream 20665795 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 24101782 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 24171706 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 24202177 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 24280211 12512966 ~ 12513262 (-)
XLOC_004264 NA non-coding downstream 546717 36242059 ~ 36246756 (-)
XLOC_004257 NA non-coding downstream 1052029 35578730 ~ 35741444 (-)
XLOC_004279 CR352285.2 non-coding upstream 335369 37299371 ~ 37299485 (-)

Expression


Co-expression Network