XLOC_004276


Basic Information

Item Value
gene id XLOC_004276
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 37085620 ~ 37095534 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00008846
GCATGTCTGTCAAACATAGTTCTGAGtgctggACACAatgtagtaagtcatccaggAAACCAATGCATACTGTACGTTTGGATAAGCTACATAAAAAGGTATAACAGGTTTCAGAGTATTGGTGCTcattattaccaaaaaaaaatgttaaaaaaagaccTAATTTCAGTAGAAAAATATTGAAGGTAGCTTATTAACTGTCATAAAACTACaagattgatgttttttttttttttatgagaatGATCATGATTTTAACCGATAAGCTCTGTAGTAATCTTAAGTGTCCTGCTCCTAGGAGGGAAAATgtcctggaagtttctagtgatTATGAAGACCCtggtttggccagaggagaaatggtcgtaccCAACTGAGACTGGTTTATCTtaaggtttagtttttttttctttcacttttgtcaCTTGAAGTTTGTTTCTCGCCTCTTGGTTTGAGAGTTGTCGAGTTGTGCATcattggatttgctcttcaatgtttggactttcagaagtgaaaataaaccacacagaactgaagtaaactgaactaaaactctgaaaactgacctGACACTGtctcagtttactagaacttttacgttaagctgttttgacacaatcttgaaaaagtttaattcaattcagctttatttgtatagcgc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00008846 True 661 lncRNA 0.35 2 37085620 37095534

Neighbor

gene id symbol gene type direction distance location
XLOC_004275 BX248521.1 coding downstream 41081 37038420 ~ 37044539 (-)
XLOC_004274 BX248521.2 coding downstream 70113 37010161 ~ 37015507 (-)
XLOC_004273 cacna1da coding downstream 121618 36793473 ~ 36964002 (-)
XLOC_004272 cacna2d3 coding downstream 319786 36688794 ~ 36765834 (-)
XLOC_004271 CR457444.8 coding downstream 458298 36620717 ~ 36627322 (-)
XLOC_004277 NINJ1 coding upstream 10106 37105640 ~ 37120954 (-)
XLOC_004278 CR352285.1 coding upstream 201967 37297501 ~ 37298097 (-)
XLOC_004279 CR352285.2 coding upstream 203837 37299371 ~ 37299485 (-)
XLOC_004280 erc2 coding upstream 215347 37310881 ~ 37425407 (-)
XLOC_004281 bsnb coding upstream 336159 37431693 ~ 37589293 (-)
XLOC_004063 CR854846.1 misc downstream 20957942 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 24393929 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 24463853 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 24494324 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 24572358 12512966 ~ 12513262 (-)
XLOC_004269 NA non-coding downstream 398459 36484392 ~ 36687161 (-)
XLOC_004270 NA non-coding downstream 516354 36568924 ~ 36569266 (-)
XLOC_004282 NA non-coding upstream 379979 37475513 ~ 37476968 (-)
XLOC_004283 NA non-coding upstream 497474 37593008 ~ 37603981 (-)
XLOC_004284 NA non-coding upstream 518013 37613547 ~ 37614538 (-)

Expression


Co-expression Network