G2356438



Basic Information


Item Value
gene id G2356438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NW_023493702.1
NCBI id JAAXML020000555.1
chromosome length 476391
location 302909 ~ 304470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2702239
aaaatgagcatttgcatccatagtcatgttttaaaccgtccataaagcactcttggccggccccggcagagagagaaagagatggtgaaaaaaaaaaaaataaatcatcagaccttccataaataattcgggccggcccccattgctaaaggtccgtagtagggtgcgccataagcggacatgaatagatggaacaccgc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2702239 True 200 lncRNA 0.46 2 302909 304470
Loading

Neighbor


gene id symbol gene type direction distance location
LOC118948643 NA coding upstream 13383 285596 ~ 289526 (+)
LOC118948660 NA coding upstream 17688 285068 ~ 285221 (+)
LOC118948684 NA coding upstream 18412 282662 ~ 284497 (+)
LOC118948642 NA coding upstream 35079 263900 ~ 267830 (+)
LOC118948659 NA coding upstream 39384 263372 ~ 263525 (+)
LOC118948685 NA coding downstream 11481 315951 ~ 317786 (+)
LOC118948662 NA coding downstream 13887 318357 ~ 318510 (+)
LOC118948644 NA coding downstream 14415 318885 ~ 322815 (+)
LOC118948686 NA coding downstream 35221 339691 ~ 341526 (+)
LOC118948663 NA coding downstream 37627 342097 ~ 342250 (+)
LOC118948670 NA non-coding upstream 41011 260967 ~ 262801 (+)
LOC118948682 NA non-coding upstream 63048 239269 ~ 241104 (+)
G2356430 NA non-coding upstream 72922 187654 ~ 229987 (+)
G2356428 NA non-coding upstream 210729 91731 ~ 92180 (+)
G2356426 NA non-coding upstream 217193 85316 ~ 85716 (+)
LOC118948645 NA non-coding downstream 38204 342625 ~ 390384 (+)
G2356449 NA non-coding downstream 57898 362368 ~ 381601 (+)
G2356445 NA non-coding downstream 59574 364044 ~ 382134 (+)
G2356444 NA non-coding downstream 60933 364684 ~ 383460 (+)
G2356446 NA non-coding downstream 61638 366108 ~ 384187 (+)
G2356442 zgc:158463 other downstream 56360 360830 ~ 379442 (+)
G2356447 NA other downstream 89120 393590 ~ 414978 (+)

Expression


G2356438 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 12.
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G2356438 Expression in each Bioproject

Bar chart with 2 bars.
G2356438 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network