XLOC_000428 (ednraa)


Basic Information

Item Value
gene id XLOC_000428
gene name ednraa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 36612660 ~ 36702355 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000733
CGCTGAGGGAGTGTGAAGTGCGTATCGGCGCAGATGAACAGTTGGAATGGGTGCGATGAGAGACGGAGCAGCAGCCAACAGTGAAGGCCATCCAGAGCTGTGCTAAATAACCCTAATCAGGCTCTTATCACCTCATCTGGAAATCAAAGAGCGGCCAGTGTTCTGCAATGGCCATTACGACGCTACAATTGTTTCTGCTAATGGCCGTTCTGGCCACTGGTGGATTATGTCTGATAAATGGCACAGAGGAAGCCCAGGATGCTTTATATCCAAACTCTACTACCTCCAAAACCAACGTACACAAGGGTTTCCAGCCCCCCACAAAAAAAGACGCTTCGGTTTTCAATATGAAGCATCCACCCTGTAGGGATCCCACTTCCATCAAGCTTTATTTTAAGTATATCAACACAATCATTTCCTGCATCGTGTTTGTGGTGGGAATAGTGGGTAATGCCACTTTATTGAAGATTATTTACCAGAATAAGTGTATGAGGAACGGACCCAATGCCCTCATCGCCAGTCTGGCTCTTGGAGACCTCATTTACATCACTATAGACATCCCTATAAATGTCTACAAGCTGCTGGTCACAAAGTGGCCATTTGATGACAGCTCCTTTGGACTCTTCCTGTGCAAACTTGTGCCATTCCTCCAGAAAGCGTCTGTTGGGATTACAGTGCTCAAtctatgtgctttgagtgtggaCAGGTACAGGGCTGTAGCCTCCTGGAGCAGAGTGCAGGGGGTCGGCGTTCCTCTTCTTACTGCCATCGAGATCTTCTCCATCTGGGTGCTGTCCATTATTTTGGCAGTACCTGAGGCAATGGTCTTCAACATGATCACCTTCACCTACAATAATCAAACCATCCGCACATGCATGCTCAAGCCTGAAACTGACTTCATGAATTTCTATGTGTACTGGAAAGATTGGTGGTTATTTGGCTTCTACTTCTGTGTGCCCCTGGCCTGCACGGCTATTTTCTACACACTCATGACCTGTGAAATGCTGCATCACAGAGATGGAAGCCTTCGCATCGCCCTCAGTGAACACCTTAAGCAGCGGCGTGAAGTGGCTAAAGCCGTCTTCTGTTTAGTGCTGATCTTTGCTCTCTGCTGGTTCCCTCTGCATCTCAGCAGACTGCTTAAGAAAATGGTTTATGTTCCAAACGATGAAAGACGTTGTGACCTGCTCAACTTCCTGTTGATCATGGATTATTTTGGTATCAACTTGGCGACTGTGAACTCTTGCATCAACCCCATCATTCTCTACTTTGTCAGCAAGAAGTTCAAGAATTGCTTTAAGTCCTGCTTGTGCTGCTGGTGTTACTCTAACAACCAGGTGTCCAGTTCAGGTCCAGTGAACGGCACTAGCATTCAGTGCAAAAACCATGAGCCCGGCAACCTCTACACCGACAGAGTCCGGAAATACAGCGACTGA
>TCONS_00000734
ATCACTTCTCGCTATGAGCATGTCTGACAAAAGGCAGATTAGGCAAGGGGTGCTTCAGGAATGTGGCTAAAACCAGACTGACTTTTCTTAGACTCATGTTATCAGTTACCTCgacatttttaatgttgtctaGTGAGTTTGAGCTTGGCCATCAACACAACATGACTGCTGCGAAAAGGGTATGTACCAATATGCACAGAGCACATTTTCACAGATGCCATCAGAGAACAAGCATATGAATTACCAGGCAGCCTGCCATCTTTGAGTTCAGACAGAATGGCATTAATACCAGATGAAGAGCCCAAACAACAACAGCACAACAACATGAAAGCCCAAAACAACTGGGACCAGCTGTGCTAAATAACCCTAATCAGGCTCTTATCACCTCATCTGGAAATCAAAGAGCGGCCAGTGTTCTGCAATGGCCATTACGACGCTACAATTGTTTCTGCTAATGGCCGTTCTGGCCACTGGTGGATTATGTCTGATAAATGGCACAGAGGAAGCCCAGGATGCTTTATATCCAAACTCTACTACCTCCAAAACCAACGTACACAAGGGTTTCCAGCCCCCCACAAAAAAAGACGCTTCGGTTTTCAATATGAAGCATCCACCCTGTAGGGATCCCACTTCCATCAAGCTTTATTTTAAGTATATCAACACAATCATTTCCTGCATCGTGTTTGTGGTGGGAATAGTGGGTAATGCCACTTTATTGAAGATTATTTACCAGAATAAGTGTATGAGGAACGGACCCAATGCCCTCATCGCCAGTCTGGCTCTTGGAGACCTCATTTACATCACTATAGACATCCCTATAAATGTCTACAAGCTGCTGGTCACAAAGTGGCCATTTGATGACAGCTCCTTTGGACTCTTCCTGTGCAAACTTGTGCCATTCCTCCAGAAAGCGTCTGTTGGGATTACAGTGCTCAAtctatgtgctttgagtgtggaCAGGTACAGGGCTGTAGCCTCCTGGAGCAGAGTGCAGGGGGTCGGCGTTCCTCTTCTTACTGCCATCGAGATCTTCTCCATCTGGGTGCTGTCCATTATTTTGGCAGTACCTGAGGCAATGGTCTTCAACATGATCACCTTCACCTACAATAATCAAACCATCCGCACATGCATGCTCAAGCCTGAAACTGACTTCATGAATTTCTATGTGTACTGGAAAGATTGGTGGTTATTTGGCTTCTACTTCTGTGTGCCCCTGGCCTGCACGGCTATTTTCTACACACTCATGACCTGTGAAATGCTGCATCACAGAGATGGAAGCCTTCGCATCGCCCTCAGTGAACACCTTAAGCAGCGGCGTGAAGTGGCTAAAGCCGTCTTCTGTTTAGTGCTGATCTTTGCTCTCTGCTGGTTCCCTCTGCATCTCAGCAGACTGCTTAAGAAAATGGTTTATGTTCCAAACGATGAAAGACGTTGTGACCTGCTCAACTTCCTGTTGATCATGGATTATTTTGGTATCAACTTGGCGACTGTGAACTCTTGCATCAACCCCATCATTCTCTACTTTGTCAGCAAGAAGTTCAAGAATTGCTTTAAGTCCTGCTTGTGCTGCTGGTGTTACTCTAACAACCAGGTGTCCAGTTCAGGTCCAGTGAACGGCACTAGCATTCAGTGCAAAAACCATGAGCCCGGCAACCTCTACACCGACAGAGTCCGGAAATACAGCGACTGA
>TCONS_00002855
GTCTGACAAAAGGCAGATTAGGCAAGGGGTGCTTCAGGAATGTGGCTAAAACCAGACTGACTTTTCTTAGACTCATGTTATCAGTTACCTCgacatttttaatgttgtctaGTGAGTTTGAGCTTGGCCATCAACACAACATGACTGCTGCGAAAAGGGTATGTACCAATATGCACAGAGCACATTTTCACAGATGCCATCAGAGAACAAGCATATGA
>TCONS_00000735
acacacatacagcaactCTCCACAGGAAAAGCTGGAGACAGAATGCGCAGCCCCTTCACAGCAGCTTTGGTGCGTCGTGGCGTCCAAATGGGATTCTGCTAGACTTTGATAGTTGGTTAATTACTCATATGATACCACACAGATGTCTGGGGGGCTCTAGCCGAATATTCGTCTCTCActaactcactgactgactgactgacgggaTCCTGGGGAAGGCAGACATTTAAGGAGCGCTGCTGGTCACAAAGTGGCCATTTGATGACAGCTCCTTTGGACTCTTCCTGTGCAAACTTGTGCCATTCCTCCAGAAAGCGTCTGTTGGGATTACAGTGCTCAAtctatgtgctttgagtgtggaCAGGTACAGGGCTGTAGCCTCCTGGAGCAG
>TCONS_00000736
caactCTCCACAGGAAAAGCTGGAGACAGAATGCGCAGCCCCTTCACAGCAGCTTTGCTGTGCTAAATAACCCTAATCAGGCTCTTATCACCTCATCTGGAAATCAAAGAGCGGCCAGTGTTCTGCAATGGCCATTACGACGCTACAATTGTTTCTGCTAATGGCCGTTCTGGCCACTGGTGGATTATGTCTGATAAATG
>TCONS_00000737
AGCAGCTTTGGTGCGTCGTGGCGTCCAAATGGGATTCTGCTAGACTTTGATAGTTGGTTAATTACTCATATGATACCACACAGATGTCTGGGGGGCTCTAGCCGAATATTCGTCTCTCActaactcactgactgactgactgacgggaTCCTGGGGAAGGCAGACATTTAAGGAGCGCTGTGCTAAATAACCCTAATCAGGCTCTTATCACCTCATCTGGAAATCAAAGAGCGGCCAGTGTTCTGCAATGGCCATTACGACGCTACAATTGTTTCTGCTAATGGCCGTTCTGGCCACTGGTGGATTATGTCTGATAAATGGCACAGAGGAAGCCCAGGATGCTTTATATCCAAACTCTACTACCTCCAAAACCAACGTACACAAGGGTTTCCAGCCCCCCACAAAAAAAGACGCTTCGGTTTTCAATATGAAGCATCCACCCTGTAGGGATCCCACTTCCATCAAGCTTTATTTTAAGTATATCAACACAATCATTTCCTGCATCGTGTTTGTGGTGGGAATAGTGGGTAATGCCACTTTATTGAAGATTATTTACCAGAATAAGTGTATGAGGAACGGACCCAATGCCCTCATCGCCAGTCTGGCTCTTGGAGACCTCATTTACATCACTATAGACATCCCTATAAATGTCTACAAGCTGCTGGTCACAAAGTGGCCATTTGATGACAGCTCCTTTGGACTCTTCCTGTGCAAACTTGTGCCATTCCTCCAGAAAGCGTCTGTTGGGATTACAGTGCTCAAtctatgtgctttgagtgtggaCAGGTACAGGGCTGTAGCCTCCTGGAGCAGAGTGCAGGGGGTCGGCGTTCCTCTTCTTACTGCCATCGAGATCTTCTCCATCTGGGTGCTGTCCATTATTTTGGCAGTACCTGAGGCAATGGTCTTCAACATGATCACCTTCACCTACAATAATCAAACCATCCGCACATGCATGCTCAAGCCTGAAACTGACTTCATGAATTTCTATGTGTACTGGAAAGATTGGTGGTTATTTGGCTTCTACTTCTGTGTGCCCCTGGCCTGCACGGCTATTTTCTACACACTCATGACCTGTGAAATGCTGCATCACAGAGATGGAAGCCTTCGCATCGCCCTCAGTGAACACCTTAAGCAGCGGCGTGAAGTGGCTAAAGCCGTCTTCTGTTTAGTGCTGATCTTTGCTCTCTGCTGGTTCCCTCTGCATCTCAGCAGACTGCTTAAGAAAATGGTTTATGTTCCAAACGATGAAAGACGTTGTGACCTGCTCAACTTCCTGTTGATCATGGATTATTTTGGTATCAACTTGGCGACTGTGAACTCTTGCATCAACCCCATCATTCTCTACTTTGTCAGCAAGAAGTTCAAGAATTGCTTTAAGTCCTGCTTGTGCTGCTGGTGTTACTCTAACAACCAGGTGTCCAGTTCAGGTCCAGTGAACGGCACTAGCATTCAGTGCAAAAACCATGAGCCCGGCAACCTCTACACCGACAGAGTCCGGAAATACAGCGACTGAGAAGAACGTTCTAAAAAAATATGCCTTAcaaaacatttatacaaacatTTATATAAGACTAAAAGGCCTTGTGCTTGGCGCATCAagctgttttaatatatatatagcttcagACCAGACAATGGACCTGATATATTTAAAGTCTCCCACAACAGCTGTTTCTCAGACTTCGGGAGTGTTGTTTTGCTGTGTGAGAAGTGGTGGGAGTGAAGACCAACAGCAACAGGATGCAGCTGAACCTAACAGCTACAAATGAACCCTGATCAAGGGCTCCACATGCTTTCCTTGGGTAAATACTGCACGACCAACACGGTCAGGATCGTCACTGTCCGATGAGAAAGGAAGTCAAAAAAAGGAAGagtgaagtttttttttggtTCCCTCCTGTGAACTTTGCCAAAGAAACTCCCAGCGTTCTGCTGAGGAGGCAGCCAATCCTTCATATTCAGCATCCGGTTGTTATTGTTAGCATATtcaaaaatgcagttttttttttttttgtttttttttttaaacaggaaccTTTAGGTCACCTCCTGCCTATATCTTTGTTTAGTTCTTAAGTGAATTGTATTGTGCGCTGGACGTCACCTCTCTTTAGGAAGAAAATGAAGATTTGTGTTTGAGTGCTAAATGagtttttatgtgtgtgcgtgtgtgtgtgtgtgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtatgaatATGTACAAAATCAAGCATAAACACAAGACAGCAAATGTGAAGGGTAGCAGATGGATTCTGTTCCAGCATTAAGGATTCAAGTGAAACTTTGACCTTGGTGGGACTTAAGAGTAATTTCTAGGAATGCATCCAACTGCAACAAATGCTGGGTtatagtaaaagaaaagaaataaagaaaaaaaaagagagcataAGGGCACGGGAAAAGGCTTTCTGTAATCCAAAAAAGTGATTCaaacattgctttatttttaCACTGTGAATTTTCTGTGAACAGGACCCATACATGCTATTTACCTTATACActttaatattattgatatttaatgGCCTCAGTATTTGTATATCATCTGTATTTTaagttgatttatttttctgtatatTGTGGTAGAAAAAATGTATCTTCGTTCAAAAGCTCAA
>TCONS_00000738
CACCTCATCTGGAAATCAAAGAGCGGCCAGTGTTCTGCAATGGCCATTACGACGCTACAATTGTTTCTGCTAATGGCCGTTCTGGCCACTGGTGGATTATGTCTGATAAATGGCACAGAGGAAGCCCAGGATGCTTTATATCCAAACTCTACTACCTCCAAAACCAACGTACACAAGGGTTTCCAGCCCCCCACAAAAAAAGACGCTTCGGTTTTCAATATGAAGCATCCACCCTGTAGGGATCCCACTTCCATCAAGCTTTATTTTAAGTATATCAACACAATCATTTCCTGCATCGTGTTTGTGGTGGGAATAGTGGGTAATGCCACTTTATTGAAGATTATTTACCAGAATAAGTGTATGAGGAACGGACCCAATGCCCTCATCGCCAGTCTGGCTCTTGGAGACCTCATTTACATCACTATAGACATCCCTATAAATGTCTACAAGCTGCTGGTCACAAAGTGGCCATTTGATGACAGCTCCTTTGGACTCTTCCTGTGCAAACTTGTGCCATTCCTCCAGAAAGCGTCTGTTGGGATTACAGTGCTCAAtctatgtgctttgagtgtggaCAGGTACAGGGCTGTAGCCTCCTGGAGCAGAGTGCAGGGGGTCGGCGTTCCTCTTCTTACTGCCATCGAGATCTTCTCCATCTGGGTGCTGTCCATTATTTTGGCAGTACCTGAGGCAATGGTCTTCAACATGATCACCTTCACCTACAATAATCAAACCATCCGCACATGCATGCTCAAGCCTGAAACTGACTTCATGAATTTCTATGTGTACTGGAAAGATTGGTGGTTATTTGGCTTCTACTTCTGTGTGCCCCTGGCCTGCACGGCTATTTTCTACACACTCATGACCTGTGAAATGCTGCATCACAGAGATGGAAGCCTTCGCATCGCCCTCAGTGAACACCTTAAGCAGCGGCGTGAAGTGGCTAAAGCCGTCTTCTGTTTAGTGCTGATCTTTGCTCTCTGCTGGTTCCCTCTGCATCTCAGCAGACTGCTTAAGAAAATGGTTTATGTTCCAAACGATGAAAGACGTTGTGACCTGCTCAACTTCCTGTTGATCATGGATTATTTTGGTATCAACTTGGCGACTGTGAACTCTTGCATCAACCCCATCATTCTCTACTTTGTCAGCAAGAAGTTCAAGAATTGCTTTAAGTCCTGCTTGTGCTGCTGGTGTTACTCTAACAACCAGGTGTCCAGTTCAGGTCCAGTGAACGGCACTAGCATTCAGTGCAAAAACCATGAGCCCGGCAACCTCTACACCGACAGAGTCCGGAAATACAGCGACTGAGAAGAACGTTCTAAAAAAATATGCCTTAcaaaacatttatacaaacatTTATATAAGACTAAAAGGCCTTGTGCTTGGCGCATCAagctgttttaatatatatatagcttcagACCAGACAATGGACCTGATATATTTAAAGTCTCCCACAACAGCTGTTTCTCAGACTTCGGGAGTGTTGTTTTGCTGTGTGAGAAGTGGTGGGAGTGAAGACCAACAGCAACAGGATGCAGCTGAACCTAACAGCTACAAATGAACCCTGATCAAGGGCTCCACATGCTTTCCTTGGGTAAATACTGCACGACCAACACGGTCAGGATCGTCACTGTCCGATGAGAAAGGAAGTCA

Function

symbol description
ednraa Predicted to enable endothelin receptor activity. Acts upstream of or within several processes, including cartilage development; regulation of proton transport; and social behavior. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in several structures, including epithelium; forebrain; neural crest; pharyngeal arch; and vasculature. Human ortholog(s) of this gene implicated in hypertension (multiple); lung disease; mandibulofacial dysostosis with alopecia; migraine; and obstructive sleep apnea. Orthologous to human EDNRA (endothelin receptor type A).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0048484 enteric nervous system development biological_process
GO:0010155 regulation of proton transport biological_process
GO:0051216 cartilage development biological_process
GO:0008217 regulation of blood pressure biological_process
GO:0042310 vasoconstriction biological_process
GO:0048066 developmental pigmentation biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004962 endothelin receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-010906-2 Predicted to enable endothelin receptor activity. Acts upstream of or within several processes, including cartilage development; regulation of proton transport; and social behavior. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in several structures, including epithelium; forebrain; neural crest; pharyngeal arch; and vasculature. Human ortholog(s) of this gene implicated in hypertension (multiple); lung disease; mandibulofacial dysostosis with alopecia; migraine; and obstructive sleep apnea. Orthologous to human EDNRA (endothelin receptor type A).

Ensembl:

ensembl_id ENSDARG00000011876

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000733 False 1436 mRNA 0.47 8 36612660 36701206
TCONS_00000734 False 1690 mRNA 0.46 9 36651059 36701206
TCONS_00002855 False 218 lncRNA 0.42 2 36651080 36657815
TCONS_00000735 False 391 processed_transcript 0.50 3 36665543 36690899
TCONS_00000736 False 200 mRNA 0.48 2 36665555 36674695
TCONS_00000737 False 2665 mRNA 0.43 8 36665602 36702355
TCONS_00000738 True 1656 mRNA 0.46 7 36674584 36701554

Neighbor

gene id symbol gene type direction distance location
XLOC_000427 pou4f2 coding upstream 172359 36436936 ~ 36440301 (+)
XLOC_000426 lsm6 coding upstream 408660 36194761 ~ 36204000 (+)
XLOC_000425 BX324156.1 coding upstream 458283 36154261 ~ 36154377 (+)
XLOC_000424 zgc:152968 coding upstream 609886 35985813 ~ 36002774 (+)
XLOC_000423 mmaa coding upstream 642401 35956435 ~ 35970259 (+)
XLOC_000429 tmem184c coding downstream 19767 36722122 ~ 36746569 (+)
XLOC_000430 arhgap10 coding downstream 69599 36771954 ~ 36913091 (+)
XLOC_000431 NA coding downstream 263645 36966000 ~ 36966282 (+)
XLOC_000432 FO704615.1 coding downstream 421287 37123642 ~ 37123772 (+)
XLOC_000433 dclk2a coding downstream 493110 37195465 ~ 37310490 (+)
XLOC_000421 NA non-coding upstream 714223 35896392 ~ 35898437 (+)
XLOC_000415 NA non-coding upstream 1519148 35034294 ~ 35093512 (+)
XLOC_000414 NA non-coding upstream 1751603 34857368 ~ 34861057 (+)
XLOC_000408 NA non-coding upstream 2158213 34450659 ~ 34454447 (+)
XLOC_000436 NA non-coding downstream 888903 37591258 ~ 37638367 (+)
XLOC_000439 NA non-coding downstream 1130992 37833347 ~ 37834392 (+)
XLOC_000440 CT583668.1 non-coding downstream 1294104 37996459 ~ 37996577 (+)

Expression


Co-expression Network